RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where bioproject = "PRJNA741997", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 27 ✖

tax_clade 1

  • Sar · 27 ✖

bioproject 1

  • PRJNA741997 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2473522 2473522 PRJNA741997_P_NODE_35002_length_367_cov_1.826531_g33882_i0 PRJNA741997 35002 367 1.826531 6.70336877 Synurophyceae 33859 SAR_Eukaryotes SAR_Eukaryotes 146 1.17e-41   NR XP_002778466.1 423536 g33882 i0 65.1 2.55040871934605 106 37 86.6 0 319 2 6 111 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 936 147 0.993197278911565 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
8374804 8374804 PRJNA741997_P_NODE_46967_length_316_cov_1.267490_g45847_i0 PRJNA741997 46967 316 1.26749 4.0052684 Pelagophyceae 35675 SAR_Eukaryotes SAR_Eukaryotes 135 2.2399999999999998e-38   NR KAF4711062.1 32597 g45847 i0 61.5 3.06645569620253 109 38 99.7 1 2 316 3 111 KAF4711062.1 hypothetical protein FOZ62_026209, partial [Perkinsus olseni] diamond 969 135 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
8851146 8851146 PRJNA741997_P_NODE_57167_length_284_cov_1.459716_g56047_i0 PRJNA741997 57167 284 1.459716 4.14559344 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 124 2.16e-31   NR KAF4657244.1 32597 g56047 i0 64.8 21.2640845070423 91 32 96.1 0 11 283 156 246 KAF4657244.1 40S ribosomal protein S3 [Perkinsus olseni] diamond 6039 125 0.992 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
12200718 12200718 PRJNA741997_P_NODE_19030_length_530_cov_1.347921_g17916_i0 PRJNA741997 19030 530 1.347921 7.1439813 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 269 4.6e-80   NR KAF4669701.1 32597 g17916 i0 74.6 25.9075471698113 177 43 99.6 2 3 530 820 995 KAF4669701.1 hypothetical protein FOZ61_003295 [Perkinsus olseni] diamond 13731 269 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
12677697 12677697 PRJNA741997_P_NODE_26570_length_429_cov_2.800562_g25450_i0 PRJNA741997 26570 429 2.800562 12.01441098 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 268 3.7699999999999996e-67   NTclustered gi|294891115|ref|XM_002773382.1| 423536 g25450 i0 82.334 78.6899766899767 317 48 73 8 21 333 387 75 Perkinsus marinus ATCC 50983 ribosomal protein S23, putative, mRNA blastn 33758 270 0.992592592592593 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
13475105 13475105 PRJNA741997_P_NODE_12991_length_679_cov_3.396040_g11920_i0 PRJNA741997 12991 679 3.39604 23.0591116 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 246 2.0900000000000003e-79   NR XP_002778466.1 423536 g11920 i0 66.3 0.839469808541974 190 63 83.5 1 29 595 1 190 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 570 246 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
14750412 14750412 PRJNA741997_P_NODE_45672_length_321_cov_1.237903_g44552_i0 PRJNA741997 45672 321 1.237903 3.97366863 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 123 1.21e-33   NR KAF4711062.1 32597 g44552 i0 66 3.46728971962617 94 30 86.9 2 42 320 4 96 KAF4711062.1 hypothetical protein FOZ62_026209, partial [Perkinsus olseni] diamond 1113 123 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
17299491 17299491 PRJNA741997_P_NODE_28634_length_411_cov_1.112426_g27514_i0 PRJNA741997 28634 411 1.112426 4.57207086 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 144 6.86e-39   NR KAF4675393.1 330153 g27514 i0 52.5 6.22627737226277 139 64 100 1 411 1 64 202 KAF4675393.1 hypothetical protein FOL47_007851 [Perkinsus chesapeaki] diamond 2559 144 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
17299761 17299761 PRJNA741997_P_NODE_71954_length_251_cov_0.865169_g70834_i0 PRJNA741997 71954 251 0.865169 2.17157419 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 107 1e-24   NR KAF4670723.1 330153 g70834 i0 64.2 22.0996015936255 81 26 96.8 1 245 3 390 467 KAF4670723.1 Protein phosphatase PP2A regulatory subunit B [Perkinsus chesapeaki] diamond 5547 107 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
19848749 19848749 PRJNA741997_P_NODE_85676_length_243_cov_0.905882_g84556_i0 PRJNA741997 85676 243 0.905882 2.20129326 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 155 1.1499999999999999e-42   NR KAF4655331.1 32597 g84556 i0 82.5 26.6666666666667 80 14 98.8 0 241 2 389 468 KAF4655331.1 hypothetical protein FOZ61_007638 [Perkinsus olseni] diamond 6480 156 0.993589743589744 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
22398944 22398944 PRJNA741997_P_NODE_46198_length_319_cov_1.252033_g45078_i0 PRJNA741997 46198 319 1.252033 3.99398527 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 58.4 6.43e-4   NTclustered gi|294947402|ref|XM_002785320.1| 423536 g45078 i0 89.13 0.144200626959248 46 5 14 0 67 112 228 273 Perkinsus marinus ATCC 50983 high mobility group protein, putative, mRNA blastn 46 58.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
23674320 23674320 PRJNA741997_P_NODE_14719_length_627_cov_1.447653_g13624_i0 PRJNA741997 14719 627 1.447653 9.07678431 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 192 4.89e-57   NR KAF4685574.1 32597 g13624 i0 48.3 2.97129186602871 207 89 99 3 1 621 4 192 KAF4685574.1 hypothetical protein FOZ62_006760, partial [Perkinsus olseni] diamond 1863 192 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
24149795 24149795 PRJNA741997_P_NODE_67239_length_261_cov_1.500000_g66119_i0 PRJNA741997 67239 261 1.5 3.915 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 131 2.59e-33   NR KAF4704733.1 32597 g66119 i0 70.9 5.93103448275862 86 25 98.9 0 259 2 646 731 KAF4704733.1 hypothetical protein FOZ63_024045 [Perkinsus olseni] diamond 1548 132 0.992424242424242 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27400288 27400288 PRJNA741997_P_NODE_10123_length_803_cov_11.005479_g9135_i0 PRJNA741997 10123 803 11.005479 88.37399637 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 174 2.56e-45   NR KAF4675741.1 330153 g9135 i0 41.8 8.14072229140722 232 133 86.7 2 798 103 748 977 KAF4675741.1 40S ribosomal protein S3-1 [Perkinsus chesapeaki] diamond 6537 174 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
27526480 27526480 PRJNA741997_P_NODE_50303_length_304_cov_1.532468_g49183_i0 PRJNA741997 50303 304 1.532468 4.65870272 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 63.5 3.95e-9   NR XP_002785901.1 423536 g49183 i0 38.2 2.55592105263158 89 52 87.8 1 270 4 1439 1524 XP_002785901.1 dna polymerase theta, putative [Perkinsus marinus ATCC 50983] diamond 777 63.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
28483914 28483914 PRJNA741997_P_NODE_53306_length_294_cov_1.316742_g52186_i0 PRJNA741997 53306 294 1.316742 3.87122148 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 75.5 7.4e-14   NR KAF4657565.1 32597 g52186 i0 35.7 11.9591836734694 98 62 99 1 3 293 9 106 KAF4657565.1 60S ribosomal protein L12, partial [Perkinsus olseni] diamond 3516 75.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28694927 28694927 PRJNA741997_P_NODE_16987_length_570_cov_1.448692_g15880_i0 PRJNA741997 16987 570 1.448692 8.2575444 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 248 6.23e-81   NR XP_002778466.1 423536 g15880 i0 65.2 0.984210526315789 187 64 97.9 1 11 568 1 187 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 561 248 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
28979052 28979052 PRJNA741997_P_NODE_46468_length_318_cov_1.257143_g45348_i0 PRJNA741997 46468 318 1.257143 3.99771474 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 105 8.76e-24   NR XP_002787797.1 423536 g45348 i0 43.8 0.990566037735849 105 54 99.1 2 317 3 3796 3895 XP_002787797.1 dynein-1-alpha heavy chain, flagellar inner arm I1 complex, putative [Perkinsus marinus ATCC 50983] diamond 315 105 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
29525903 29525903 PRJNA741997_P_NODE_51130_length_301_cov_1.350877_g50010_i0 PRJNA741997 51130 301 1.350877 4.06613977 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 112 4.28e-28   NR KAF4656208.1 330153 g50010 i0 65.5 4.06644518272425 84 28 82.7 1 300 52 169 252 KAF4656208.1 hypothetical protein FOL47_009100 [Perkinsus chesapeaki] diamond 1224 113 0.991150442477876 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
29641607 29641607 PRJNA741997_P_NODE_36230_length_361_cov_1.069444_g35110_i0 PRJNA741997 36230 361 1.069444 3.86069284 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 71.2 1.02e-13   NR XP_002781677.1 423536 g35110 i0 63.2 1.39612188365651 57 21 47.4 0 286 116 8 64 XP_002781677.1 stress associated endoplasmic reticulum protein, putative, partial [Perkinsus marinus ATCC 50983] diamond 504 71.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
29809815 29809815 PRJNA741997_P_NODE_40151_length_342_cov_2.494424_g39031_i0 PRJNA741997 40151 342 2.494424 8.53093008 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 49.7 4.29e-4   NR KAF4741994.1 32597 g39031 i0 33.3 1.83333333333333 81 43 64 2 335 117 481 558 KAF4741994.1 hypothetical protein FOZ63_034089 [Perkinsus olseni] diamond 627 50.1 0.992015968063872 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30400546 30400546 PRJNA741997_P_NODE_29833_length_401_cov_1.567073_g28713_i0 PRJNA741997 29833 401 1.567073 6.28396273 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 67.4 5.2400000000000005e-10   NR XP_002781612.1 423536 g28713 i0 32.6 2.8428927680798 129 82 95 2 6 386 424 549 XP_002781612.1 hypothetical protein Pmar_PMAR027492, partial [Perkinsus marinus ATCC 50983] diamond 1140 67.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
30621124 30621124 PRJNA741997_P_NODE_11513_length_737_cov_6.585843_g10475_i0 PRJNA741997 11513 737 6.585843 48.53766291 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 166 5.839999999999998e-43   NR KAF4675741.1 330153 g10475 i0 39.9 7.62822252374491 233 135 94 3 735 43 748 977 KAF4675741.1 40S ribosomal protein S3-1 [Perkinsus chesapeaki] diamond 5622 166 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
30621126 30621126 PRJNA741997_P_NODE_16133_length_589_cov_11.017442_g15027_i0 PRJNA741997 16133 589 11.017442 64.89273338 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 81.6 8.19e-16   NR XP_002784356.1 423536 g15027 i0 31.8 1.37011884550085 129 88 65.7 0 69 455 19 147 XP_002784356.1 ubiquitin, putative [Perkinsus marinus ATCC 50983] diamond 807 81.6 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
30789347 30789347 PRJNA741997_P_NODE_66454_length_263_cov_1.252632_g65334_i0 PRJNA741997 66454 263 1.252632 3.29442216 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 68.9 1.33e-11   NR KAF4741985.1 32597 g65334 i0 56.9 6.01140684410646 65 26 74.1 2 259 65 109 171 KAF4741985.1 hypothetical protein FOZ63_011800, partial [Perkinsus olseni] diamond 1581 68.9 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31832474 31832474 PRJNA741997_P_NODE_45677_length_321_cov_1.209677_g44557_i0 PRJNA741997 45677 321 1.209677 3.88306317 root 1 Root_unresolved Root_unresolved 106 3.55e-24   NR XP_002771800.1 423536 g44557 i0 57.8 3.04672897196262 83 35 77.6 0 321 73 756 838 XP_002771800.1 elongation factor 2, putative [Perkinsus marinus ATCC 50983] diamond 978 106 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
32275865 32275865 PRJNA741997_P_NODE_76658_length_248_cov_1.760000_g75538_i0 PRJNA741997 76658 248 1.76 4.3648 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 83.2 1.28e-18   NR KAF4693495.1 32597 g75538 i0 52.5 5.70967741935484 80 36 96.8 1 2 241 21 98 KAF4693495.1 hypothetical protein FOZ60_010677 [Perkinsus olseni] diamond 1416 83.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;