contig_metadata
21 rows where bioproject = "PRJNA741997", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1997684 | 1997684 | PRJNA741997_P_NODE_74362_length_250_cov_0.870056_g73242_i0 | PRJNA741997 | 74362 | 250 | 0.870056 | 2.17514 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 147 | 6.739999999999999e-40 | NR | MES2121918.1 | 2081524 | g73242 | i0 | 84.3 | 1.992 | 83 | 13 | 99.6 | 0 | 249 | 1 | 273 | 355 | MES2121918.1 L-serine ammonia-lyase [Chlamydiota bacterium] | diamond | 498 | 147 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 3272656 | 3272656 | PRJNA741997_P_NODE_19143_length_528_cov_1.481319_g18029_i0 | PRJNA741997 | 19143 | 528 | 1.481319 | 7.82136432 | Waddliaceae bacterium | 2026802 | Bacteria | Bacteria | 188 | 2.769999999999999e-55 | NR | HEY4831209.1 | 2026802 | g18029 | i0 | 66.9 | 0.840909090909091 | 148 | 49 | 84.1 | 0 | 528 | 85 | 201 | 348 | HEY4831209.1 F0F1 ATP synthase subunit alpha [Waddliaceae bacterium] | diamond | 444 | 188 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddliaceae bacterium | ||
| 3272996 | 3272996 | PRJNA741997_P_NODE_74743_length_249_cov_2.318182_g73623_i0 | PRJNA741997 | 74743 | 249 | 2.318182 | 5.77227318 | Chlamydiales bacterium CRIB 34 | 492543 | Bacteria | Bacteria | 368 | 1.97e-97 | NTclustered | gi|165911249|gb|EU363465.1| | 492543 | g73623 | i0 | 95.633 | 95.0722891566265 | 229 | 10 | 92 | 0 | 17 | 245 | 140 | 368 | Chlamydiales bacterium CRIB 34 16S ribosomal RNA gene, partial sequence | blastn | 23673 | 368 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium CRIB 34 | |||
| 7100196 | 7100196 | PRJNA741997_P_NODE_47986_length_312_cov_1.598326_g46866_i0 | PRJNA741997 | 47986 | 312 | 1.598326 | 4.98677712 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 153 | 1.38e-44 | NR | MCX6987734.1 | 2081524 | g46866 | i0 | 66.3 | 10.7211538461538 | 101 | 34 | 97.1 | 0 | 2 | 304 | 13 | 113 | MCX6987734.1 superoxide dismutase [Chlamydiota bacterium] | diamond | 3345 | 153 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 12200780 | 12200780 | PRJNA741997_P_NODE_28810_length_409_cov_2.068452_g27690_i0 | PRJNA741997 | 28810 | 409 | 2.068452 | 8.45996868 | root | 1 | Root_unresolved | Root_unresolved | 229 | 1.2499999999999998e-69 | NR | MCH9609760.1 | 2047757 | g27690 | i0 | 77.2 | 11.9633251833741 | 136 | 31 | 99.8 | 0 | 2 | 409 | 250 | 385 | MCH9609760.1 Phosphoenolpyruvate carboxykinase [GTP] [Chlamydiales bacterium] | diamond | 4893 | 229 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 16024146 | 16024146 | PRJNA741997_P_NODE_59073_length_280_cov_1.251208_g57953_i0 | PRJNA741997 | 59073 | 280 | 1.251208 | 3.5033824 | root | 1 | Root_unresolved | Root_unresolved | 156 | 1.18e-46 | NR | MCB1084350.1 | 34094 | g57953 | i0 | 78.4 | 3.78214285714286 | 88 | 19 | 94.3 | 0 | 277 | 14 | 9 | 96 | MCB1084350.1 MC/SLC25 family protein [Simkania sp.] | diamond | 1059 | 157 | 0.993630573248408 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 27084259 | 27084259 | PRJNA741997_P_NODE_90062_length_241_cov_0.910714_g88942_i0 | PRJNA741997 | 90062 | 241 | 0.910714 | 2.19482074 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 64.7 | 2.78e-10 | NR | MBI5273578.1 | 2047757 | g88942 | i0 | 53.1 | 0.609958506224066 | 49 | 23 | 61 | 0 | 1 | 147 | 186 | 234 | MBI5273578.1 2OG-Fe(II) oxygenase [Chlamydiales bacterium] | diamond | 147 | 64.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 27115520 | 27115520 | PRJNA741997_P_NODE_38222_length_351_cov_1.384892_g37102_i0 | PRJNA741997 | 38222 | 351 | 1.384892 | 4.86097092 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 119 | 8.14e-29 | NR | MFT5050156.1 | 2047757 | g37102 | i0 | 49.1 | 2.82905982905983 | 110 | 56 | 94 | 0 | 338 | 9 | 259 | 368 | MFT5050156.1 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein [Chlamydiales bacterium] | diamond | 993 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 27210381 | 27210381 | PRJNA741997_P_NODE_47042_length_316_cov_0.946502_g45922_i0 | PRJNA741997 | 47042 | 316 | 0.946502 | 2.99094632 | Simkania sp. | 34094 | Bacteria | Bacteria | 82 | 4.03e-17 | NR | MCB1084323.1 | 34094 | g45922 | i0 | 48 | 0.930379746835443 | 98 | 42 | 93 | 3 | 294 | 1 | 29 | 117 | MCB1084323.1 AMP-binding protein [Simkania sp.] | diamond | 294 | 82 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 27337175 | 27337175 | PRJNA741997_P_NODE_87923_length_242_cov_0.911243_g86803_i0 | PRJNA741997 | 87923 | 242 | 0.911243 | 2.20520806 | Simkania sp. | 34094 | Bacteria | Bacteria | 58.9 | 1.86e-9 | NR | MCB1084368.1 | 34094 | g86803 | i0 | 69.4 | 0.446280991735537 | 36 | 11 | 44.6 | 0 | 204 | 97 | 29 | 64 | MCB1084368.1 hypothetical protein [Simkania sp.] | diamond | 108 | 58.9 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 27968516 | 27968516 | PRJNA741997_P_NODE_60725_length_276_cov_1.517241_g59605_i0 | PRJNA741997 | 60725 | 276 | 1.517241 | 4.18758516 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 48.1 | 5.64e-4 | NR | MBM3201113.1 | 2081524 | g59605 | i0 | 42.6 | 0.58695652173913 | 54 | 31 | 58.7 | 0 | 264 | 103 | 114 | 167 | MBM3201113.1 hypothetical protein [Chlamydiota bacterium] | diamond | 162 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 28000312 | 28000312 | PRJNA741997_P_NODE_22445_length_476_cov_6.540943_g21327_i0 | PRJNA741997 | 22445 | 476 | 6.540943 | 31.13488868 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 162 | 4.67e-48 | NR | MCP5470420.1 | 2047757 | g21327 | i0 | 60.8 | 0.901260504201681 | 143 | 56 | 90.1 | 0 | 474 | 46 | 4 | 146 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 429 | 162 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 28126511 | 28126511 | PRJNA741997_P_NODE_79445_length_247_cov_0.885057_g78325_i0 | PRJNA741997 | 79445 | 247 | 0.885057 | 2.18609079 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 48.5 | 1.98e-4 | NR | MDP1609002.1 | 2047757 | g78325 | i0 | 38.8 | 0.813765182186235 | 67 | 39 | 80.2 | 2 | 222 | 25 | 44 | 109 | MDP1609002.1 hypothetical protein [Chlamydiales bacterium] | diamond | 201 | 48.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 28757778 | 28757778 | PRJNA741997_P_NODE_24387_length_453_cov_5.697368_g23267_i0 | PRJNA741997 | 24387 | 453 | 5.697368 | 25.80907704 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 109 | 3.8800000000000006e-27 | NR | MCP5470420.1 | 2047757 | g23267 | i0 | 48.8 | 1.60264900662252 | 123 | 62 | 80.8 | 1 | 452 | 87 | 2 | 124 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 726 | 109 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 28789278 | 28789278 | PRJNA741997_P_NODE_39647_length_344_cov_3.350554_g38527_i0 | PRJNA741997 | 39647 | 344 | 3.350554 | 11.52590576 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 107 | 8.54e-27 | NR | MCP5470420.1 | 2047757 | g38527 | i0 | 48.2 | 0.994186046511628 | 114 | 59 | 99.4 | 0 | 342 | 1 | 4 | 117 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 342 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 28820703 | 28820703 | PRJNA741997_P_NODE_36868_length_358_cov_0.933333_g35748_i0 | PRJNA741997 | 36868 | 358 | 0.933333 | 3.34133214 | Simkania sp. | 34094 | Bacteria | Bacteria | 160 | 1.64e-46 | NR | MCB1084310.1 | 34094 | g35748 | i0 | 67.5 | 0.955307262569832 | 114 | 37 | 95.5 | 0 | 356 | 15 | 78 | 191 | MCB1084310.1 hypothetical protein [Simkania sp.] | diamond | 342 | 160 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 29967897 | 29967897 | PRJNA741997_P_NODE_25211_length_444_cov_1.760108_g24091_i0 | PRJNA741997 | 25211 | 444 | 1.760108 | 7.81487952 | Bacteria | 2 | Bacteria | Bacteria | 63.2 | 1.07e-8 | NR | MBM3196163.1 | 2081524 | g24091 | i0 | 27.7 | 2.01351351351351 | 148 | 88 | 99.3 | 4 | 4 | 444 | 68 | 197 | MBM3196163.1 hypothetical protein [Chlamydiota bacterium] | diamond | 894 | 63.2 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 30178870 | 30178870 | PRJNA741997_P_NODE_86332_length_243_cov_0.905882_g85212_i0 | PRJNA741997 | 86332 | 243 | 0.905882 | 2.20129326 | Chlamydiia bacterium | 2052156 | Bacteria | Bacteria | 61.6 | 8.06e-9 | NR | MCB1072267.1 | 2052156 | g85212 | i0 | 44.8 | 4.22222222222222 | 67 | 36 | 81.5 | 1 | 30 | 227 | 528 | 594 | MCB1072267.1 adenylyl cyclase [Chlamydiia bacterium] | diamond | 1026 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiia bacterium | ||||
| 32654565 | 32654565 | PRJNA741997_P_NODE_54220_length_291_cov_1.059633_g53100_i0 | PRJNA741997 | 54220 | 291 | 1.059633 | 3.08353203 | Chlamydiia | 204429 | Bacteria | Bacteria | 80.1 | 1.76e-15 | NR | WP_098038745.1 | 483423 | g53100 | i0 | 43 | 4.82474226804124 | 93 | 50 | 94.8 | 2 | 276 | 1 | 148 | 238 | WP_098038745.1 dual specificity protein phosphatase family protein [Estrella lausannensis] | diamond | 1404 | 80.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Estrella | Estrella lausannensis | |
| 32833751 | 32833751 | PRJNA741997_P_NODE_89860_length_241_cov_0.916667_g88740_i0 | PRJNA741997 | 89860 | 241 | 0.916667 | 2.20916747 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 76.3 | 4.86e-14 | NR | MBM3198222.1 | 2081524 | g88740 | i0 | 51.3 | 0.995850622406639 | 80 | 34 | 93.4 | 2 | 239 | 15 | 336 | 415 | MBM3198222.1 hypothetical protein [Chlamydiota bacterium] | diamond | 240 | 76.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 32896546 | 32896546 | PRJNA741997_P_NODE_37180_length_356_cov_1.360424_g36060_i0 | PRJNA741997 | 37180 | 356 | 1.360424 | 4.84310944 | Waddlia chondrophila | 71667 | Bacteria | Bacteria | 146 | 1.7899999999999996e-38 | NR | WP_013182645.1 | 71667 | g36060 | i0 | 58.5 | 1.89606741573034 | 118 | 49 | 99.4 | 0 | 354 | 1 | 2 | 119 | WP_013182645.1 phosphoenolpyruvate carboxykinase (GTP) [Waddlia chondrophila] | diamond | 675 | 146 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;