RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA741997", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 2 ✖

bioproject 1

  • PRJNA741997 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27873816 27873816 PRJNA741997_P_NODE_78785_length_247_cov_0.885057_g77665_i0 PRJNA741997 78785 247 0.885057 2.18609079 Methanosphaera sp. 2666342 Archaea Archaea 50.1 1.02e-4   NR MEE3419037.1 2666342 g77665 i0 40 0.728744939271255 60 34 72.9 1 60 239 215 272 MEE3419037.1 hypothetical protein [Methanosphaera sp.] diamond 180 50.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
30621156 30621156 PRJNA741997_P_NODE_58113_length_282_cov_1.368421_g56993_i0 PRJNA741997 58113 282 1.368421 3.85894722 Methanobrevibacter woesei 190976 Archaea Archaea 44.7 0.0125   NR MCC9261869.1 190976 g56993 i0 40.3 4.53191489361702 72 36 70.2 2 18 215 244 314 MCC9261869.1 hypothetical protein [Methanobrevibacter woesei] diamond 1278 44.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter woesei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;