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contig_metadata

13 rows where bioproject = "PRJNA741997", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 13 ✖

tax_clade 1

  • Metamonada · 13 ✖

bioproject 1

  • PRJNA741997 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3272981 3272981 PRJNA741997_P_NODE_72983_length_250_cov_2.011299_g71863_i0 PRJNA741997 72983 250 2.011299 5.0282475 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 3.12e-25   NR BAC98826.1 63628 g71863 i0 71.2 4.392 73 21 87.6 0 221 3 369 441 BAC98826.1 enolase [Trichonympha agilis] diamond 1098 108 0.990740740740741 Eukaryota Metamonada   Parabasalia   Trichonymphida Trichonymphidae Trichonympha Trichonympha agilis
10925543 10925543 PRJNA741997_P_NODE_71509_length_251_cov_1.247191_g70389_i0 PRJNA741997 71509 251 1.247191 3.13044941 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 110 1.33e-19   NTclustered gi|2794895333|ref|XM_067923466.1| 135588 g70389 i0 89.535 1.0199203187251 86 9 36 0 2 87 574 659 Histomonas meleagridis XYPPX repeat family protein (GO595_009747), partial mRNA blastn 256 110 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
18573276 18573276 PRJNA741997_P_NODE_58615_length_281_cov_1.245192_g57495_i0 PRJNA741997 58615 281 1.245192 3.49898952 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.007   NTclustered gi|2806450614|ref|XM_068500446.1| 1144522 g57495 i0 100 0.103202846975089 29 0 10 0 70 98 4312 4340 Tritrichomonas foetus uncharacterized protein (TRFO_18903), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27210359 27210359 PRJNA741997_P_NODE_17862_length_551_cov_13.359833_g16751_i0 PRJNA741997 17862 551 13.359833 73.61267983 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 199 1.7599999999999998e-61   NR XP_068360038.1 1144522 g16751 i0 57.2 8.50453720508167 173 74 94.2 0 24 542 5 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 4686 199 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27915356 27915356 PRJNA741997_P_NODE_20705_length_502_cov_1.724942_g19589_i0 PRJNA741997 20705 502 1.724942 8.65920884 root 1 Root_unresolved Root_unresolved 74.3 4.36e-12   NR XP_067775051.1 135588 g19589 i0 62.9 1.53585657370518 62 21 37.1 1 3 188 343 402 XP_067775051.1 succinate-CoA ligase [Histomonas meleagridis] diamond 771 74.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
28442318 28442318 PRJNA741997_P_NODE_68086_length_259_cov_1.612903_g66966_i0 PRJNA741997 68086 259 1.612903 4.17741877 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 106 4.33e-26   NR XP_001329048.1 412133 g66966 i0 52.3 0.996138996138996 86 41 99.6 0 258 1 136 221 XP_001329048.1 oxidized pyrimidine nucleobase lesion DNA N-glycosylase protein [Trichomonas vaginalis G3] diamond 258 106 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28631851 28631851 PRJNA741997_P_NODE_9807_length_821_cov_2.056150_g8834_i0 PRJNA741997 9807 821 2.05615 16.8809915 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 74.7 3.65e-12   NR XP_001304133.1 412133 g8834 i0 29.4 0.595615103532278 163 109 58.1 4 806 330 7 167 XP_001304133.1 GTPase protein [Trichomonas vaginalis G3] diamond 489 74.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29010900 29010900 PRJNA741997_P_NODE_79008_length_247_cov_0.885057_g77888_i0 PRJNA741997 79008 247 0.885057 2.18609079 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 52.8 1.1e-5   NR XP_001307110.1 412133 g77888 i0 38.7 0.910931174089069 75 45 91.1 1 1 225 26 99 XP_001307110.1 protein kinase protein [Trichomonas vaginalis G3] diamond 225 52.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29357836 29357836 PRJNA741997_P_NODE_26729_length_428_cov_1.290141_g25609_i0 PRJNA741997 26729 428 1.290141 5.52180348 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 169 2.55e-50   NR XP_068360038.1 1144522 g25609 i0 59.6 10.8294392523364 141 57 98.8 0 2 424 11 151 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 4635 169 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29957722 29957722 PRJNA741997_P_NODE_51471_length_300_cov_1.334802_g50351_i0 PRJNA741997 51471 300 1.334802 4.004406 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 112 1.27e-26   NR XP_068366445.1 1144522 g50351 i0 60 3 100 40 100 0 300 1 71 170 XP_068366445.1 enolase family protein [Tritrichomonas foetus] diamond 900 112 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31895899 31895899 PRJNA741997_P_NODE_36237_length_361_cov_1.069444_g35117_i0 PRJNA741997 36237 361 1.069444 3.86069284 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 4.09e-5   NR XP_068348217.1 1144522 g35117 i0 45 1.94459833795014 60 32 49.9 1 326 147 254 312 XP_068348217.1 uncharacterized protein TRFO_38725 [Tritrichomonas foetus] diamond 702 53.1 0.994350282485876 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32075687 32075687 PRJNA741997_P_NODE_89518_length_241_cov_0.916667_g88398_i0 PRJNA741997 89518 241 0.916667 2.20916747 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 63.5 5.72e-11   NR XP_001320398.1 412133 g88398 i0 63 0.572614107883817 46 17 57.3 0 241 104 15 60 XP_001320398.1 DNA binding [Trichomonas vaginalis G3] diamond 138 63.5 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32802195 32802195 PRJNA741997_P_NODE_81720_length_245_cov_3.186047_g80600_i0 PRJNA741997 81720 245 3.186047 7.80581515 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 70.1 2.6e-13   NR XP_067769820.1 135588 g80600 i0 54.9 0.869387755102041 71 31 86.9 1 215 3 15 84 XP_067769820.1 uncharacterized protein GO595_009871 [Histomonas meleagridis] diamond 213 70.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;