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contig_metadata

28 rows where bioproject = "PRJNA741997", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 28 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 28 ✖

bioproject 1

  • PRJNA741997 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
721468 721468 PRJNA741997_P_NODE_42961_length_331_cov_1.306202_g41841_i0 PRJNA741997 42961 331 1.306202 4.32352862 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 99 3.95e-16   NTclustered gi|2874254163|emb|OY970395.1| 412054 g41841 i0 84.314 0.308157099697885 102 14 31 2 175 275 2484682 2484582 MAG: uncultured Gemmatimonadales bacterium isolate MFD05684.bin.c.1 genome assembly, chromosome: 1 blastn 102 99 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
7100003 7100003 PRJNA741997_P_NODE_16546_length_580_cov_1.250493_g15440_i0 PRJNA741997 16546 580 1.250493 7.2528594 root 1 Root_unresolved Root_unresolved 172 4.61e-50   NR HUX32288.1 2026741 g15440 i0 55.7 6.39310344827586 176 74 91 3 529 2 7 178 HUX32288.1 SDR family NAD(P)-dependent oxidoreductase [Gemmatimonadaceae bacterium] diamond 3708 172 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
8375024 8375024 PRJNA741997_P_NODE_80187_length_246_cov_1.751445_g79067_i0 PRJNA741997 80187 246 1.751445 4.3085547 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 124 4.64e-24   NTclustered gi|2874253755|emb|OY969695.1| 412054 g79067 i0 86.726 41.2642276422764 113 13 46 2 132 243 257296 257407 MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 blastn 10151 124 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
9649949 9649949 PRJNA741997_P_NODE_45148_length_323_cov_1.156000_g44028_i0 PRJNA741997 45148 323 1.156 3.73388 uncultured Gemmatimonadaceae bacterium 246130 Bacteria Bacteria 56.5 0.002   NTclustered gi|2874253995|emb|OY970320.1| 246130 g44028 i0 94.595 0.114551083591331 37 1 11 1 89 125 1815626 1815591 MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 blastn 37 56.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   uncultured Gemmatimonadaceae bacterium
10925589 10925589 PRJNA741997_P_NODE_78949_length_247_cov_0.885057_g77829_i0 PRJNA741997 78949 247 0.885057 2.18609079 Gemmatimonas sp. UBA7669 1946568 Bacteria Bacteria 147 4.38e-41   NR WP_291162467.1 1946568 g77829 i0 93.8 0.983805668016194 81 5 98.4 0 245 3 191 271 WP_291162467.1 EscU/YscU/HrcU family type III secretion system export apparatus switch protein [Gemmatimonas sp. UBA7669] diamond 243 147 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatimonas Gemmatimonas sp. UBA7669
13475499 13475499 PRJNA741997_P_NODE_75391_length_249_cov_0.875000_g74271_i0 PRJNA741997 75391 249 0.875 2.17875 Longimicrobiales bacterium 2910168 Bacteria Bacteria 90.5 5.09e-20   NR HSK19940.1 2910168 g74271 i0 53.7 5.63855421686747 82 37 97.6 1 244 2 134 215 HSK19940.1 MTAP family purine nucleoside phosphorylase [Longimicrobiales bacterium] diamond 1404 90.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
23674308 23674308 PRJNA741997_P_NODE_12879_length_684_cov_1.319149_g11809_i0 PRJNA741997 12879 684 1.319149 9.02297916 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 192 6.169999999999999e-55   NR MBX3146122.1 2448054 g11809 i0 51.1 6.12280701754386 178 86 78.1 1 536 3 2 178 MBX3146122.1 aspartate aminotransferase family protein [Gemmatimonadales bacterium] diamond 4188 192 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
26767736 26767736 PRJNA741997_P_NODE_56721_length_285_cov_1.448113_g55601_i0 PRJNA741997 56721 285 1.448113 4.12712205 Longimicrobium sp. 2029185 Bacteria Bacteria 119 7.640000000000001e-29   NR HET7232322.1 2029185 g55601 i0 59.2 2.05263157894737 98 35 98.9 3 2 283 1995 2091 HET7232322.1 alpha-2-macroglobulin family protein [Longimicrobium sp.] diamond 585 119 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
27242110 27242110 PRJNA741997_P_NODE_54423_length_290_cov_1.419355_g53303_i0 PRJNA741997 54423 290 1.419355 4.1161295 Gemmatirosa kalamazoonensis 861299 Bacteria Bacteria 70.9 3.7e-12   NR WP_025410086.1 861299 g53303 i0 41.2 1.00344827586207 97 39 97.2 2 5 286 162 243 WP_025410086.1 D-hexose-6-phosphate mutarotase [Gemmatirosa kalamazoonensis] diamond 291 70.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatirosa Gemmatirosa kalamazoonensis
27716353 27716353 PRJNA741997_P_NODE_86404_length_243_cov_0.905882_g85284_i0 PRJNA741997 86404 243 0.905882 2.20129326 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 45.4 0.00432   NR MBY0489218.1 2026741 g85284 i0 29.6 2.67901234567901 81 56 100 1 1 243 45 124 MBY0489218.1 ERAP1-like C-terminal domain-containing protein [Gemmatimonadaceae bacterium] diamond 651 45.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
27842101 27842101 PRJNA741997_P_NODE_82584_length_245_cov_0.895349_g81464_i0 PRJNA741997 82584 245 0.895349 2.19360505 Roseisolibacter sp. H3M3-2 3031323 Bacteria Bacteria 68.9 2.23e-11   NR WP_275835706.1 3031323 g81464 i0 49.4 0.96734693877551 79 39 96.7 1 243 7 14 91 WP_275835706.1 hypothetical protein, partial [Roseisolibacter sp. H3M3-2] diamond 237 68.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Roseisolibacter Roseisolibacter sp. H3M3-2
27915355 27915355 PRJNA741997_P_NODE_1865_length_1890_cov_3.833242_g628_i1 PRJNA741997 1865 1890 3.833242 72.4482738 FCB group 1783270 Bacteria Bacteria 115 1.46e-22   NR MEP6833624.1 1962908 g628 i1 29 5.61904761904762 558 288 76.8 29 12 1463 974 1497 MEP6833624.1 SdrD B-like domain-containing protein [Gemmatimonas sp.] diamond 10620 116 0.991379310344828 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatimonas Gemmatimonas sp.
28979084 28979084 PRJNA741997_P_NODE_81688_length_246_cov_0.878613_g80568_i0 PRJNA741997 81688 246 0.878613 2.16138798 Longimicrobium sp. 2029185 Bacteria Bacteria 43.5 0.0214   NR HEX6369684.1 2029185 g80568 i0 37.7 0.841463414634146 69 38 78 1 4 195 552 620 HEX6369684.1 BamA/TamA family outer membrane protein [Longimicrobium sp.] diamond 207 43.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
29010871 29010871 PRJNA741997_P_NODE_49548_length_307_cov_1.316239_g48428_i0 PRJNA741997 49548 307 1.316239 4.04085373 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 79.7 7.92e-15   NR MEJ2546793.1 2026742 g48428 i0 44.9 2.63843648208469 98 48 93.8 4 290 3 462 555 MEJ2546793.1 leishmanolysin-related zinc metalloendopeptidase [Gemmatimonadota bacterium] diamond 810 79.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29210157 29210157 PRJNA741997_P_NODE_80129_length_246_cov_1.780347_g79009_i0 PRJNA741997 80129 246 1.780347 4.37965362 FCB group 1783270 Bacteria Bacteria 112 1.7300000000000003e-27   NR HWC05895.1 2026742 g79009 i0 60.5 12.8414634146341 81 32 98.8 0 243 1 269 349 HWC05895.1 multicopper oxidase domain-containing protein [Gemmatimonadota bacterium] diamond 3159 113 0.991150442477876 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29231675 29231675 PRJNA741997_P_NODE_66649_length_262_cov_1.767196_g65529_i0 PRJNA741997 66649 262 1.767196 4.63005352 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 160 1.04e-43   NR MBY0492186.1 2026741 g65529 i0 90.7 0.984732824427481 86 8 98.5 0 260 3 224 309 MBY0492186.1 carbohydrate binding family 9 domain-containing protein [Gemmatimonadaceae bacterium] diamond 258 160 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30021140 30021140 PRJNA741997_P_NODE_63451_length_270_cov_1.304569_g62331_i0 PRJNA741997 63451 270 1.304569 3.5223363 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 53.5 7.98e-6   NR HEX4934307.1 2026741 g62331 i0 50 1.47777777777778 70 30 74.4 2 204 4 251 318 HEX4934307.1 hypothetical protein [Gemmatimonadaceae bacterium] diamond 399 53.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30021159 30021159 PRJNA741997_P_NODE_83531_length_244_cov_1.801170_g82411_i0 PRJNA741997 83531 244 1.80117 4.3948548 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 85.5 2.4e-17   NR MBL8960662.1 2026742 g82411 i0 53.6 2.54508196721311 69 31 84.8 1 2 208 300 367 MBL8960662.1 hypothetical protein [Gemmatimonadota bacterium] diamond 621 85.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30094058 30094058 PRJNA741997_P_NODE_29452_length_404_cov_1.555891_g28332_i0 PRJNA741997 29452 404 1.555891 6.28579964 Bacteria 2 Bacteria Bacteria 54.7 1.43e-5   NR MDZ4864164.1 2026742 g28332 i0 38.2 2.27970297029703 89 52 65.3 3 341 78 265 351 MDZ4864164.1 kelch repeat-containing protein [Gemmatimonadota bacterium] diamond 921 54.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30210249 30210249 PRJNA741997_P_NODE_29632_length_403_cov_1.145455_g28512_i0 PRJNA741997 29632 403 1.145455 4.61618365 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 47 0.0071   NR HWA57824.1 2448054 g28512 i0 36.8 0.56575682382134 76 39 56.6 1 255 28 696 762 HWA57824.1 hypothetical protein [Gemmatimonadales bacterium] diamond 228 47 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
30220541 30220541 PRJNA741997_P_NODE_23072_length_469_cov_1.358586_g21953_i0 PRJNA741997 23072 469 1.358586 6.37176834 FCB group 1783270 Bacteria Bacteria 100 1.3800000000000001e-22   NR HEX8830466.1 2029185 g21953 i0 43.2 4.92537313432836 132 64 84.4 2 1 396 153 273 HEX8830466.1 purine-nucleoside phosphorylase [Longimicrobium sp.] diamond 2310 101 0.99009900990099 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
30432085 30432085 PRJNA741997_P_NODE_54893_length_289_cov_1.425926_g53773_i0 PRJNA741997 54893 289 1.425926 4.12092614 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 44.3 0.0184   NR HUP20017.1 2026742 g53773 i0 40 0.674740484429066 65 39 67.5 0 47 241 399 463 HUP20017.1 ATP-binding protein [Gemmatimonadota bacterium] diamond 195 44.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31032287 31032287 PRJNA741997_P_NODE_78355_length_247_cov_1.793103_g77235_i0 PRJNA741997 78355 247 1.793103 4.42896441 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 49.7 8.68e-5   NR MBA2670368.1 2026742 g77235 i0 50 0.680161943319838 56 20 68 2 171 4 34 81 MBA2670368.1 CHRD domain-containing protein [Gemmatimonadota bacterium] diamond 168 49.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31316464 31316464 PRJNA741997_P_NODE_34855_length_368_cov_1.501695_g33735_i0 PRJNA741997 34855 368 1.501695 5.5262376 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 47.8 0.00111   NR HEY7566466.1 2026741 g33735 i0 30.1 0.676630434782609 83 57 67.7 1 118 366 31 112 HEY7566466.1 CHRD domain-containing protein [Gemmatimonadaceae bacterium] diamond 249 47.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31769358 31769358 PRJNA741997_P_NODE_70857_length_252_cov_1.720670_g69737_i0 PRJNA741997 70857 252 1.72067 4.3360884 Bacteria 2 Bacteria Bacteria 50.8 5.77e-5   NR MDQ3604795.1 2026742 g69737 i0 45.6 2.47619047619048 57 28 67.9 2 81 251 34 87 MDQ3604795.1 sodium-translocating pyrophosphatase [Gemmatimonadota bacterium] diamond 624 50.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32012431 32012431 PRJNA741997_P_NODE_57318_length_284_cov_1.094787_g56198_i0 PRJNA741997 57318 284 1.094787 3.10919508 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 47.8 0.00102   NR HKV76217.1 2448054 g56198 i0 57.1 1.62676056338028 35 15 37 0 106 2 217 251 HKV76217.1 leishmanolysin-related zinc metalloendopeptidase [Gemmatimonadales bacterium] diamond 462 47.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
32434083 32434083 PRJNA741997_P_NODE_2619_length_1667_cov_3.545797_g628_i2 PRJNA741997 2619 1667 3.545797 59.10843599 Pseudomonadati 3379134 Bacteria Bacteria 109 7.54e-21   NR MEP6833624.1 1962908 g628 i2 29.6 2.27654469106179 467 246 74 24 8 1240 1058 1497 MEP6833624.1 SdrD B-like domain-containing protein [Gemmatimonas sp.] diamond 3795 109 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatimonas Gemmatimonas sp.
32582028 32582028 PRJNA741997_P_NODE_74319_length_250_cov_0.870056_g73199_i0 PRJNA741997 74319 250 0.870056 2.17514 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 71.2 1.9e-13   NR HKH82912.1 2448054 g73199 i0 49.3 3.564 67 34 80.4 0 3 203 60 126 HKH82912.1 hypothetical protein [Gemmatimonadales bacterium] diamond 891 71.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;