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contig_metadata

20 rows where bioproject = "PRJNA738523" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 20 ✖

bioproject 1

  • PRJNA738523 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1995542 1995542 PRJNA738523_P_NODE_10182_length_253_cov_1.711111_g10111_i0 PRJNA738523 10182 253 1.711111 4.32911083 Caudoviricetes sp. 2832643 Viruses Viruses 412 9.14e-111   NTclustered gi|2914880774|gb|OR222049.1| 2832643 g10111 i0 96.047 1 253 10 100 0 1 253 30250 30502 MAG: Caudoviricetes sp. isolate MSP0066 genomic sequence blastn 253 412 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
1995594 1995594 PRJNA738523_P_NODE_22_length_2516_cov_2.247646_g18_i0 PRJNA738523 22 2516 2.247646 56.55077336 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 754 9.9e-245   NR AVM87439.1 3063761 g18 i0 45.7 1.08028616852146 906 379 99.8 7 6 2516 395 1256 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 2718 754 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
1995628 1995628 PRJNA738523_P_NODE_6902_length_285_cov_1.405660_g6831_i0 PRJNA738523 6902 285 1.40566 4.006131 Zebrafish picornavirus 1 2304617 Viruses Viruses 481 2.83e-131   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g6831 i0 98.529 2.86315789473684 272 4 95 0 14 285 3644 3373 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 816 481 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
3270874 3270874 PRJNA738523_P_NODE_16603_length_226_cov_2.738562_g16532_i0 PRJNA738523 16603 226 2.738562 6.18915012 Escherichia phage TR2 2978981 Viruses Viruses 418 1.7199999999999998e-112   NTclustered gi|2312628476|gb|OP251154.1| 2978981 g16532 i0 100 1 226 0 100 0 1 226 19976 19751 Escherichia phage TR2, complete genome blastn 226 418 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Drexlerviridae Christensenvirus Escherichia phage TR2
8372849 8372849 PRJNA738523_P_NODE_5867_length_300_cov_0.903084_g5796_i0 PRJNA738523 5867 300 0.903084 2.709252 Zebrafish picornavirus 1 2304617 Viruses Viruses 516 8.23e-142   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g5796 i0 97.667 3 300 7 100 0 1 300 7364 7663 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 900 516 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
9647978 9647978 PRJNA738523_P_NODE_368_length_965_cov_2.612108_g322_i0 PRJNA738523 368 965 2.612108 25.2068422 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 569 2.1799999999999998e-157   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g322 i0 97.321 0.637305699481865 336 8 64 1 411 746 771 1105 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 615 569 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
10923503 10923503 PRJNA738523_P_NODE_6569_length_288_cov_1.641860_g6498_i0 PRJNA738523 6569 288 1.64186 4.7285568 Zebrafish picornavirus 1 2304617 Viruses Viruses 499 7.92e-137   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g6498 i0 97.917 3 288 6 100 0 1 288 4290 4003 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 864 499 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
14748448 14748448 PRJNA738523_P_NODE_12352_length_248_cov_0.880000_g12281_i0 PRJNA738523 12352 248 0.88 2.1824 Zebrafish picornavirus 1 2304617 Viruses Viruses 425 1.15e-114   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g12281 i0 97.581 3 248 6 100 0 1 248 2755 3002 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 744 425 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
15226268 15226268 PRJNA738523_P_NODE_11872_length_249_cov_0.875000_g11801_i0 PRJNA738523 11872 249 0.875 2.17875 Dismasvirus 2560122 Viruses Viruses 52.8 0.023   NTclustered gi|2486599177|ref|NC_073433.1| 2829393 g11801 i0 100 0.337349397590361 28 0 11 0 125 152 9087 9060 Microbacterium phage Stoor, complete genome blastn 84 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Dismasvirus Microbacterium phage Stoor
16022163 16022163 PRJNA738523_P_NODE_4733_length_325_cov_2.166667_g4662_i0 PRJNA738523 4733 325 2.166667 7.04166775 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 399 9.469999999999998e-107   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g4662 i0 99.099 0.683076923076923 222 2 68 0 104 325 2 223 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 222 399 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
21122112 21122112 PRJNA738523_P_NODE_17_length_2890_cov_5.047568_g13_i0 PRJNA738523 17 2890 5.047568 145.8747152 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2795 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g13 i0 95.833 0.871280276816609 1728 70 87 2 1155 2881 5329 7055 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 2518 2795 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
23672552 23672552 PRJNA738523_P_NODE_1999_length_457_cov_1.799479_g1928_i0 PRJNA738523 1999 457 1.799479 8.22361903 Zebrafish picornavirus 1 2304617 Viruses Viruses 693 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g1928 i0 94.273 2.92778993435449 454 24 99 2 5 457 5215 5667 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 1338 693 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24945987 24945987 PRJNA738523_P_NODE_15880_length_241_cov_1.440476_g15809_i0 PRJNA738523 15880 241 1.440476 3.47154716 Zebrafish picornavirus 1 2304617 Viruses Viruses 396 8.7e-106   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g15809 i0 96.639 2.97510373443983 238 8 99 0 4 241 2268 2031 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 717 396 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24946006 24946006 PRJNA738523_P_NODE_3860_length_349_cov_1.344203_g3789_i0 PRJNA738523 3860 349 1.344203 4.69126847 Zebrafish picornavirus 1 2304617 Viruses Viruses 590 5.649999999999998e-164   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g3789 i0 97.135 2.98280802292264 349 10 100 0 1 349 6689 6341 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1041 590 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
26894516 26894516 PRJNA738523_P_NODE_1_length_7247_cov_15.105241_g0_i0 PRJNA738523 1 7247 15.105241 1094.67681527 Zebrafish gut calicivirus RQ08 Viruses Viruses 1520 0   NR XBS25272.1 RQ08 g0 i0 39.4 0.937629363874707 2265 1226 90.7 45 7158 589 10 2203 XBS25272.1 MAG: ORF1 protein [Barramundi calicivirus 1] diamond 6795 1520 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Caliciviridae   Zebrafish gut calicivirus
29105297 29105297 PRJNA738523_P_NODE_1308_length_555_cov_1.437759_g1238_i0 PRJNA738523 1308 555 1.437759 7.97956245 Phyllosticta citriasiana partitivirus 1 2501044 Viruses Viruses 110 1.74e-24   NR AZT88588.1 2501044 g1238 i0 34.9 0.92972972972973 172 104 89.2 3 61 555 66 236 AZT88588.1 RNA-dependent RNA polymerase [Phyllosticta citriasiana partitivirus 1] diamond 516 110 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Phyllosticta citriasiana partitivirus 1
31727491 31727491 PRJNA738523_P_NODE_10417_length_251_cov_1.702247_g10346_i0 PRJNA738523 10417 251 1.702247 4.27263997 Acidovorax phage ACP17 2010329 Viruses Viruses 84.7 1.03e-17   NR YP_009609642.1 2010329 g10346 i0 54.3 0.968127490039841 81 34 96.8 2 243 1 102 179 YP_009609642.1 baseplate tail tube cap [Acidovorax phage ACP17] diamond 243 84.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Busanvirus Busanvirus ACP17
31854025 31854025 PRJNA738523_P_NODE_14917_length_243_cov_0.905882_g14846_i0 PRJNA738523 14917 243 0.905882 2.20129326 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 51.2 4.02e-5   NR XCM68128.1 3003959 g14846 i0 39.2 0.975308641975309 79 47 97.5 1 4 240 1177 1254 XCM68128.1 MAG: polyprotein, partial [Picornavirales sp.] diamond 237 51.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32329079 32329079 PRJNA738523_P_NODE_4699_length_326_cov_1.798419_g4628_i0 PRJNA738523 4699 326 1.798419 5.86284594 Nigrospora oryzae partitivirus 1 2269000 Viruses Viruses 46.2 0.00571   NR AXF84302.1 2269000 g4628 i0 41.8 0.506134969325153 55 32 50.6 0 4 168 442 496 AXF84302.1 RNA-dependent RNA polymerase [Nigrospora oryzae partitivirus 1] diamond 165 46.2 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Nigrospora oryzae partitivirus 1
32707705 32707705 PRJNA738523_P_NODE_13540_length_246_cov_0.890173_g13469_i0 PRJNA738523 13540 246 0.890173 2.18982558 Fadolivirus algeromassiliense 3060017 Viruses Viruses 67.4 9.69e-12   NR YP_010803991.1 3060017 g13469 i0 37.5 0.975609756097561 80 49 97.6 1 242 3 49 127 YP_010803991.1 hypothetical protein QKU48_gp1108 [Fadolivirus algeromassiliense] diamond 240 67.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;