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contig_metadata

14 rows where bioproject = "PRJNA738523" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 14 ✖

bioproject 1

  • PRJNA738523 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25424344 25424344 PRJNA738523_P_NODE_16000_length_241_cov_0.916667_g15929_i0 PRJNA738523 16000 241 0.916667 2.20916747 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 303 5.42e-78   NTclustered gi|937513727|gb|CP012850.1| 1353260 g15929 i0 90.171 56.5228215767635 234 21 97 2 1 233 849066 849298 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 13622 303 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
26672313 26672313 PRJNA738523_P_NODE_4481_length_332_cov_0.891892_g4410_i0 PRJNA738523 4481 332 0.891892 2.96108144 archaeon 1906665 Archaea Archaea 143 2.61e-38   NR MDP2437844.1 1906665 g4410 i0 65 4.51807228915663 100 35 90.4 0 2 301 325 424 MDP2437844.1 type II methionyl aminopeptidase [archaeon] diamond 1500 143 1 Archaea               archaeon
26988985 26988985 PRJNA738523_P_NODE_7262_length_281_cov_1.514423_g7191_i0 PRJNA738523 7262 281 1.514423 4.25552863 archaeon 1906665 Archaea Archaea 43.9 0.0212   NR RYH22573.1 1906665 g7191 i0 41 0.65124555160142406 61 34 65.1 1 243 61 138 196 RYH22573.1 MAG: hypothetical protein EON65_19030, partial [archaeon] diamond 183 43.9 1 Archaea               archaeon
27431946 27431946 PRJNA738523_P_NODE_10943_length_250_cov_1.740113_g10872_i0 PRJNA738523 10943 250 1.740113 4.3502825 archaeon 1906665 Archaea Archaea 75.1 3.81e-15   NR RYG52457.1 1906665 g10872 i0 55.2 0.804 67 29 79.2 1 199 2 6 72 RYG52457.1 MAG: hypothetical protein EON67_01195, partial [archaeon] diamond 201 75.1 1 Archaea               archaeon
27747653 27747653 PRJNA738523_P_NODE_13304_length_246_cov_0.890173_g13233_i0 PRJNA738523 13304 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 115 7.2399999999999995e-28   NR RYG57585.1 1906665 g13233 i0 65 0.975609756097561 80 28 97.6 0 6 245 205 284 RYG57585.1 MAG: hypothetical protein EON66_00045 [archaeon] diamond 240 115 1 Archaea               archaeon
28631758 28631758 PRJNA738523_P_NODE_7087_length_283_cov_1.371429_g7016_i0 PRJNA738523 7087 283 1.371429 3.88114407 archaeon 1906665 Archaea Archaea 115 9.13e-28   NR RYY34477.1 1906665 g7016 i0 62.4 0.985865724381625 93 35 98.6 0 5 283 340 432 RYY34477.1 MAG: ATP-binding cassette domain-containing protein, partial [archaeon] diamond 279 115 1 Archaea               archaeon
28820663 28820663 PRJNA738523_P_NODE_6448_length_290_cov_1.064516_g6377_i0 PRJNA738523 6448 290 1.064516 3.0870964 archaeon 1906665 Archaea Archaea 49.3 2.98e-4   NR RYY33198.1 1906665 g6377 i0 35.7 0.868965517241379 84 51 86.9 3 290 39 162 242 RYY33198.1 MAG: SET domain-containing protein-lysine N-methyltransferase, partial [archaeon] diamond 252 49.3 1 Archaea               archaeon
29200030 29200030 PRJNA738523_P_NODE_15449_length_242_cov_0.911243_g15378_i0 PRJNA738523 15449 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 107 8.84e-25   NR MDP2436156.1 1906665 g15378 i0 65 0.991735537190083 80 28 99.2 0 3 242 565 644 MDP2436156.1 hypothetical protein [archaeon] diamond 240 107 1 Archaea               archaeon
29515393 29515393 PRJNA738523_P_NODE_11070_length_250_cov_0.870056_g10999_i0 PRJNA738523 11070 250 0.870056 2.17514 archaeon 1906665 Archaea Archaea 70.9 2.38e-12   NR RYG51924.1 1906665 g10999 i0 68.8 0.576 48 15 57.6 0 250 107 196 243 RYG51924.1 MAG: AAA family ATPase [archaeon] diamond 144 70.9 1 Archaea               archaeon
29578520 29578520 PRJNA738523_P_NODE_7270_length_281_cov_1.480769_g7199_i0 PRJNA738523 7270 281 1.480769 4.16096089 archaeon 1906665 Archaea Archaea 172 5.83e-53   NR MDP2438463.1 1906665 g7199 i0 84.9 0.99288256227758 93 14 99.3 0 280 2 6 98 MDP2438463.1 MC/SLC25 family protein [archaeon] diamond 279 172 1 Archaea               archaeon
29799652 29799652 PRJNA738523_P_NODE_11811_length_249_cov_0.875000_g11740_i0 PRJNA738523 11811 249 0.875 2.17875 archaeon 1906665 Archaea Archaea 123 1.2799999999999999e-31   NR MDP2434610.1 1906665 g11740 i0 63.4 0.987951807228916 82 30 98.8 0 247 2 193 274 MDP2434610.1 AGC family serine/threonine-protein kinase [archaeon] diamond 246 123 1 Archaea               archaeon
31379791 31379791 PRJNA738523_P_NODE_13856_length_245_cov_0.895349_g13785_i0 PRJNA738523 13856 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 65.9 3.53e-11   NR RYG42029.1 1906665 g13785 i0 71.4 0.514285714285714 42 12 51.4 0 3 128 1 42 RYG42029.1 MAG: hypothetical protein EON68_02370 [archaeon] diamond 126 65.9 1 Archaea               archaeon
31990741 31990741 PRJNA738523_P_NODE_8358_length_270_cov_2.091371_g8287_i0 PRJNA738523 8358 270 2.091371 5.6467017 root 1 Root_unresolved Root_unresolved 112 1.17e-26   NR AIF04411.1 1457931 g8287 i0 54.5 4.94444444444444 88 40 97.8 0 4 267 338 425 AIF04411.1 aldehyde dehydrogenase (dmpC) [uncultured marine group II/III euryarchaeote KM3_174_A11] diamond 1335 113 0.991150442477876 Archaea   Methanobacteriati Methanobacteriota         uncultured marine group II/III euryarchaeote KM3_174_A11
32012365 32012365 PRJNA738523_P_NODE_6438_length_290_cov_1.115207_g6367_i0 PRJNA738523 6438 290 1.115207 3.2341003 archaeon 1906665 Archaea Archaea 58.2 4.04e-8   NR RYG43734.1 1906665 g6367 i0 53 0.682758620689655 66 26 64.1 3 288 103 81 145 RYG43734.1 MAG: hypothetical protein EON67_12585 [archaeon] diamond 198 58.2 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;