RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA738523", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA738523 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10923448 10923448 PRJNA738523_P_NODE_14229_length_244_cov_1.783626_g14158_i0 PRJNA738523 14229 244 1.783626 4.35204744 Patiria miniata 46514 Echinodermata other_Eukaryota 58.4 4.73e-4   NTclustered gi|1944932961|ref|XM_038222080.1| 46514 g14158 i0 91.111 0.483606557377049 45 0 18 4 167 211 5086 5126 PREDICTED: Patiria miniata bromodomain and WD repeat-containing protein 3-like (LOC119745602), transcript variant X1, mRNA blastn 118 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
18571367 18571367 PRJNA738523_P_NODE_7615_length_278_cov_1.024390_g7544_i0 PRJNA738523 7615 278 1.02439 2.8478042 Patiria miniata 46514 Echinodermata other_Eukaryota 231 3.06e-56   NTclustered gi|1944861957|ref|XM_038196751.1| 46514 g7544 i0 82.206 45.3273381294964 281 38 99 11 1 275 797 1071 PREDICTED: Patiria miniata 26S proteasome regulatory subunit 6A-B (LOC119725354), mRNA blastn 12601 231 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
27557796 27557796 PRJNA738523_P_NODE_14564_length_244_cov_0.900585_g14493_i0 PRJNA738523 14564 244 0.900585 2.1974274 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 142 1.73e-37   NR KAJ8036388.1 206669 g14493 i0 84.8 16.8319672131148 79 12 97.1 0 5 241 141 219 KAJ8036388.1 Selenoprotein O [Holothuria leucospilota] diamond 4107 142 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
28473744 28473744 PRJNA738523_P_NODE_13986_length_245_cov_0.895349_g13915_i0 PRJNA738523 13986 245 0.895349 2.19360505 Diadema antillarum 105358 Echinodermata other_Eukaryota 62.4 4.58e-9   NR XP_071500776.1 105358 g13915 i0 43.2 0.991836734693878 81 40 99.2 2 243 1 723 797 XP_071500776.1 uncharacterized protein [Diadema antillarum] diamond 243 62.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
30536565 30536565 PRJNA738523_P_NODE_6053_length_296_cov_1.381166_g5982_i0 PRJNA738523 6053 296 1.381166 4.08825136 Metazoa 33208 Echinodermata other_Eukaryota 115 3.6199999999999997e-28   NR XP_033109301.1 1529436 g5982 i0 56.8 11.625 95 41 96.3 0 286 2 38 132 XP_033109301.1 uncharacterized protein LOC117110650 [Anneissia japonica] diamond 3441 116 0.991379310344828 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
31000431 31000431 PRJNA738523_P_NODE_10434_length_251_cov_1.539326_g10363_i0 PRJNA738523 10434 251 1.539326 3.86370826 Diadema antillarum 105358 Echinodermata other_Eukaryota 50.1 9.57e-5   NR XP_071508287.1 105358 g10363 i0 42.1 1.2191235059761 57 33 68.1 0 63 233 190 246 XP_071508287.1 transmembrane protein 53-like [Diadema antillarum] diamond 306 50.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
32812256 32812256 PRJNA738523_P_NODE_11980_length_248_cov_2.000000_g11909_i0 PRJNA738523 11980 248 2 4.96 Metazoa 33208 Echinodermata other_Eukaryota 117 4.76e-32   NR XP_022087362.1 133434 g11909 i0 74.7 6.55645161290323 75 19 90.7 0 248 24 11 85 XP_022087362.1 probable 60S ribosomal protein L37-A isoform X2 [Acanthaster planci] diamond 1626 117 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;