RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA738523", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 17 ✖

tax_kingdom 1

  • Fungi · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA738523 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
719500 719500 PRJNA738523_P_NODE_11301_length_250_cov_0.870056_g11230_i0 PRJNA738523 11301 250 0.870056 2.17514 Synchytrium microbalum 1806994 Fungi Fungi 150 7.799999999999999e-32   NTclustered gi|1759143555|ref|XM_031167200.1| 1806994 g11230 i0 82.456 51.224 171 30 68 0 11 181 266 96 Synchytrium microbalum uncharacterized protein (SmJEL517_g01272), partial mRNA blastn 12806 150 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
13473380 13473380 PRJNA738523_P_NODE_1671_length_496_cov_2.323877_g1600_i0 PRJNA738523 1671 496 2.323877 11.52642992 Polychytrium aggregatum 110093 Fungi Fungi 309 2.6e-79   NTclustered gi|2432155310|ref|XM_053111519.1| 110093 g1600 i0 83.792 65.2802419354839 327 51 66 2 106 431 416 91 Polychytrium aggregatum 60S ribosomal protein L23 (BJ171DRAFT_510921), mRNA blastn 32379 309 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18571296 18571296 PRJNA738523_P_NODE_12855_length_247_cov_0.885057_g12784_i0 PRJNA738523 12855 247 0.885057 2.18609079 Chytridiomycetes 451435 Fungi Fungi 108 1.52e-25   NR XP_006680394.1 684364 g12784 i0 71.3 13.3724696356275 80 20 97.2 1 8 247 254 330 XP_006680394.1 uncharacterized protein BATDEDRAFT_35493 [Batrachochytrium dendrobatidis JAM81] diamond 3303 108 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
22875198 22875198 PRJNA738523_P_NODE_14458_length_244_cov_0.900585_g14387_i0 PRJNA738523 14458 244 0.900585 2.1974274 Eukaryota 2759 Fungi Fungi 119 5.99e-29   NR KAI8799717.1 109936 g14387 i0 67.5 7.94262295081967 80 26 98.4 0 4 243 860 939 KAI8799717.1 armadillo-type protein [Cladochytrium replicatum] diamond 1938 119 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
27789290 27789290 PRJNA738523_P_NODE_7544_length_278_cov_2.151220_g7473_i0 PRJNA738523 7544 278 2.15122 5.9803916 Chytridiomycetes 451435 Fungi Fungi 102 4.4699999999999996e-23   NR KAJ3043701.1 64517 g7473 i0 59.3 6.66906474820144 86 35 92.8 0 7 264 973 1058 KAJ3043701.1 hypothetical protein HDV00_004474 [Rhizophlyctis rosea] diamond 1854 103 0.990291262135922 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
28663220 28663220 PRJNA738523_P_NODE_13227_length_246_cov_0.890173_g13156_i0 PRJNA738523 13227 246 0.890173 2.18982558 Spizellomyces sp. 'palustris' 117820 Fungi Fungi 58.2 1.35e-7   NR TPX66730.1 117820 g13156 i0 40.5 4.57317073170732 79 39 89 4 227 9 195 271 TPX66730.1 hypothetical protein SpCBS45565_g04245 [Spizellomyces sp. 'palustris'] diamond 1125 58.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces sp. 'palustris'
28947535 28947535 PRJNA738523_P_NODE_12128_length_248_cov_0.880000_g12057_i0 PRJNA738523 12128 248 0.88 2.1824 Lobulomycetales sp. 2058121 Fungi Fungi 44.3 0.0115   NR KAL3901614.1 2058121 g12057 i0 41.7 0.725806451612903 60 33 70.2 2 222 49 76 135 KAL3901614.1 MAG: hypothetical protein SGCHY_000478 [Lobulomycetales sp.] diamond 180 44.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales     Lobulomycetales sp.
29136996 29136996 PRJNA738523_P_NODE_6469_length_289_cov_1.962963_g6398_i0 PRJNA738523 6469 289 1.962963 5.67296307 Chytriomyces hyalinus 4814 Fungi Fungi 43.5 0.0321   NR KAJ3235980.1 4814 g6398 i0 33.3 0.996539792387543 96 50 99.7 3 288 1 183 264 KAJ3235980.1 hypothetical protein HDU78_004893 [Chytriomyces hyalinus] diamond 288 43.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
29462301 29462301 PRJNA738523_P_NODE_13870_length_245_cov_0.895349_g13799_i0 PRJNA738523 13870 245 0.895349 2.19360505 Eukaryota 2759 Fungi Fungi 108 3.55e-25   NR KAJ3045421.1 64517 g13799 i0 60.8 3.91836734693878 79 31 96.7 0 3 239 298 376 KAJ3045421.1 hypothetical protein HDV00_010291 [Rhizophlyctis rosea] diamond 960 109 0.990825688073395 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
29673168 29673168 PRJNA738523_P_NODE_7650_length_277_cov_1.764706_g7579_i0 PRJNA738523 7650 277 1.764706 4.88823562 Hyaloraphidium curvatum 82268 Fungi Fungi 79.7 4.95e-17   NR KAI9031506.1 82268 g7579 i0 46.7 0.996389891696751 92 47 98.6 2 275 3 4 94 KAI9031506.1 hypothetical protein DFJ74DRAFT_702514 [Hyaloraphidium curvatum] diamond 276 79.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
30337298 30337298 PRJNA738523_P_NODE_7152_length_282_cov_1.473684_g7081_i0 PRJNA738523 7152 282 1.473684 4.15578888 Neocallimastix lanati (nom. inval.) 2767002 Fungi Fungi 53.5 9.93e-6   NR KAG4105456.1 2767002 g7081 i0 31.6 3.04255319148936 95 63 98.9 1 282 4 739 833 KAG4105456.1 hypothetical protein H8356DRAFT_1027706 [Neocallimastix lanati (nom. inval.)] diamond 858 53.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix lanati (nom. inval.)
30694519 30694519 PRJNA738523_P_NODE_14673_length_244_cov_0.859649_g14602_i0 PRJNA738523 14673 244 0.859649 2.09754356 Chytridiales 4810 Fungi Fungi 85.5 2.96e-19   NR KAI8854483.1 64509 g14602 i0 50.7 8.28688524590164 75 37 92.2 0 5 229 25 99 KAI8854483.1 ribosomal protein L31e-domain-containing protein [Chytridium lagenaria] diamond 2022 85.9 0.9953434225844 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Chytridium Chytridium lagenaria
31759200 31759200 PRJNA738523_P_NODE_7857_length_275_cov_1.524752_g7786_i0 PRJNA738523 7857 275 1.524752 4.193068 Nowakowskiella sp. JEL 2012159 Fungi Fungi 64.3 1.1e-9   NR KAJ1554264.1 2732417 g7786 i0 36.7 2.97818181818182 79 44 79.6 1 221 3 98 176 KAJ1554264.1 hypothetical protein HK096_004343 [Nowakowskiella sp. JEL0078] diamond 819 64.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JEL0078
31769337 31769337 PRJNA738523_P_NODE_3217_length_374_cov_1.531561_g3146_i0 PRJNA738523 3217 374 1.531561 5.72803814 Opisthokonta 33154 Fungi Fungi 110 6.12e-28   NR KAI9332063.1 110081 g3146 i0 50.4 8.35026737967914 115 55 90.6 1 371 33 32 146 KAI9332063.1 hypothetical protein BDR26DRAFT_869592 [Obelidium mucronatum] diamond 3123 110 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Obelidium Obelidium mucronatum
32138940 32138940 PRJNA738523_P_NODE_14958_length_243_cov_0.905882_g14887_i0 PRJNA738523 14958 243 0.905882 2.20129326 Podochytrium sp. JEL 2750441 Fungi Fungi 82.4 1.09e-16   NR KAJ3074335.1 2724200 g14887 i0 45.1 1.01234567901235 82 43 98.8 1 1 240 156 237 KAJ3074335.1 F-actin-capping protein [Podochytrium sp. JEL0797] diamond 246 82.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Podochytrium Podochytrium sp. JEL0797
32202209 32202209 PRJNA738523_P_NODE_14198_length_244_cov_2.251462_g14127_i0 PRJNA738523 14198 244 2.251462 5.49356728 Quaeritorhiza haematococci 2654861 Fungi Fungi 101 6.85e-23   NR KAJ3088549.1 2654861 g14127 i0 62.5 0.983606557377049 80 29 98.4 1 242 3 498 576 KAJ3088549.1 Long chain acyl-CoA synthetase 7 peroxisomal [Quaeritorhiza haematococci] diamond 240 101 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
32392044 32392044 PRJNA738523_P_NODE_16579_length_228_cov_2.180645_g16508_i0 PRJNA738523 16579 228 2.180645 4.9718706 Synchytrium microbalum 1806994 Fungi Fungi 44.3 0.00856   NR XP_031028000.1 1806994 g16508 i0 41.5 1.07894736842105 82 29 84.2 4 8 199 198 278 XP_031028000.1 uncharacterized protein SmJEL517_g00070 [Synchytrium microbalum] diamond 246 44.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;