RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA738523", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 13 ✖

tax_clade 1

  • Sar · 13 ✖

bioproject 1

  • PRJNA738523 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14748449 14748449 PRJNA738523_P_NODE_12472_length_248_cov_0.880000_g12401_i0 PRJNA738523 12472 248 0.88 2.1824 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 237 5.77e-58   NTclustered gi|471220213|ref|XM_004025132.1| 5932 g12401 i0 84.362 32.7137096774194 243 36 98 2 1 242 112 353 Ichthyophthirius multifiliis hypothetical protein (IMG5_190240) mRNA, complete cds blastn 8113 237 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
19846482 19846482 PRJNA738523_P_NODE_13956_length_245_cov_0.895349_g13885_i0 PRJNA738523 13956 245 0.895349 2.19360505 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 244 3.4e-60   NTclustered gi|1725297735|gb|MN295600.1| 282688 g13885 i0 85.47 1.91020408163265 234 34 96 0 6 239 1126 1359 Philasterides dicentrarchi trichocyst matrix protein T2-A gene, complete cds blastn 468 244 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
25424346 25424346 PRJNA738523_P_NODE_3240_length_373_cov_1.796667_g3169_i0 PRJNA738523 3240 373 1.796667 6.70156791 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 357 6.71e-94   NTclustered gi|10158|emb|X06653.1| 5949 g3169 i0 84.239 96.1179624664879 368 57 98 1 5 371 146 513 Stylonychia macronuclear beta-1 tubulin gene blastn 35852 359 0.994428969359331 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28410592 28410592 PRJNA738523_P_NODE_16506_length_232_cov_2.603774_g16435_i0 PRJNA738523 16506 232 2.603774 6.04075568 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 48.5 2.83e-4   NR CDW87782.1 5949 g16435 i0 41.7 2.36637931034483 60 32 73.7 2 223 53 176 235 CDW87782.1 UNKNOWN [Stylonychia lemnae] diamond 549 48.5 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28473741 28473741 PRJNA738523_P_NODE_10766_length_251_cov_0.865169_g10695_i0 PRJNA738523 10766 251 0.865169 2.17157419 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 68.2 4.48e-11   NR XP_001441397.1 5888 g10695 i0 45.8 0.860557768924303 72 38 84.9 1 215 3 303 374 XP_001441397.1 uncharacterized protein GSPATT00010234001 [Paramecium tetraurelia] diamond 216 68.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
29042179 29042179 PRJNA738523_P_NODE_5428_length_309_cov_1.631356_g5357_i0 PRJNA738523 5428 309 1.631356 5.04089004 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.0093   NR CAI2380290.1 5936 g5357 i0 37.5 0.854368932038835 88 43 73.8 3 2 229 456 543 CAI2380290.1 unnamed protein product [Moneuplotes crassus] diamond 264 45.4 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
29420699 29420699 PRJNA738523_P_NODE_5549_length_307_cov_1.085470_g5478_i0 PRJNA738523 5549 307 1.08547 3.3323929 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 50.8 1.21e-4   NR XP_001026455.2 312017 g5478 i0 42.6 0.938110749185668 47 27 45.9 0 282 142 1850 1896 XP_001026455.2 REJ domain protein [Tetrahymena thermophila SB210] diamond 288 50.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
29831329 29831329 PRJNA738523_P_NODE_7891_length_275_cov_1.500000_g7820_i0 PRJNA738523 7891 275 1.5 4.125 Tetrahymena utriculariae 2486642 SAR_Eukaryotes SAR_Eukaryotes 49.7 1.93e-4   NR KAL4498575.1 2486642 g7820 i0 41.7 0.523636363636364 48 28 52.4 0 95 238 149 196 KAL4498575.1 hypothetical protein ABPG72_019693 [Tetrahymena utriculariae] diamond 144 49.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena utriculariae
30684254 30684254 PRJNA738523_P_NODE_13033_length_247_cov_0.885057_g12962_i0 PRJNA738523 13033 247 0.885057 2.18609079 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 63.5 2.23e-10   NR KRX04337.1 266149 g12962 i0 41.8 0.959514170040486 79 40 96 2 1 237 18 90 KRX04337.1 hypothetical protein PPERSA_03577 [Pseudocohnilembus persalinus] diamond 237 63.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
30905689 30905689 PRJNA738523_P_NODE_10874_length_251_cov_0.865169_g10803_i0 PRJNA738523 10874 251 0.865169 2.17157419 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 63.9 1.41e-9   NR CAG9326425.1 1481888 g10803 i0 44.4 0.968127490039841 81 45 96.8 0 249 7 745 825 CAG9326425.1 unnamed protein product [Blepharisma stoltei] diamond 243 63.9 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
31032185 31032185 PRJNA738523_P_NODE_11155_length_250_cov_0.870056_g11084_i0 PRJNA738523 11155 250 0.870056 2.17514 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 48.5 3.6e-4   NR KRX07445.1 266149 g11084 i0 52.1 0.576 48 20 57.6 2 94 237 245 289 KRX07445.1 Trypsin-like cysteine/serine peptidase domain [Pseudocohnilembus persalinus] diamond 144 48.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31284686 31284686 PRJNA738523_P_NODE_16495_length_232_cov_3.081761_g16424_i0 PRJNA738523 16495 232 3.081761 7.14968552 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 64.3 1.91e-10   NR KRX00193.1 266149 g16424 i0 88.6 0.452586206896552 35 4 45.3 0 232 128 41 75 KRX00193.1 Zinc-binding ribosomal protein [Pseudocohnilembus persalinus] diamond 105 64.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32739392 32739392 PRJNA738523_P_NODE_5940_length_298_cov_1.711111_g5869_i0 PRJNA738523 5940 298 1.711111 5.09911078 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 127 5.96e-35   NR XP_001449603.1 5888 g5869 i0 61.2 1.97315436241611 98 36 96.6 1 11 298 1 98 XP_001449603.1 uncharacterized protein GSPATT00002335001 [Paramecium tetraurelia] diamond 588 127 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;