RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA737474" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA737474 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32953196 32953196 PRJNA737474d_S_NODE_14978_length_397_cov_2.533951_g14384_i0 PRJNA737474 14978 397 2.533951 10.05978547 Lentisphaeraceae bacterium 2461380 Bacteria Bacteria 99 7.27e-24   NR MCM8540510.1 2461380 g14384 i0 72.6 0.468513853904282 62 17 46.9 0 196 11 8 69 MCM8540510.1 MGMT family protein [Lentisphaeraceae bacterium] diamond 186 99 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae   Lentisphaeraceae bacterium
33056972 33056972 PRJNA737474g_S_NODE_205253_length_276_cov_1.137931_g203959_i0 PRJNA737474 205253 276 1.137931 3.14068956 Lentisphaera profundi 1658616 Bacteria Bacteria 85.1 1.13e-17   NR WP_274149790.1 1658616 g203959 i0 58.5 1.41304347826087 65 26 70.7 1 219 25 55 118 WP_274149790.1 SDR family NAD(P)-dependent oxidoreductase [Lentisphaera profundi] diamond 390 85.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae Lentisphaera Lentisphaera profundi
33057709 33057709 PRJNA737474g_S_NODE_91885_length_335_cov_2.431298_g90591_i0 PRJNA737474 91885 335 2.431298 8.1448483 Lentisphaerota bacterium 1932692 Bacteria Bacteria 45.8 0.00642   NR NQT94391.1 1932692 g90591 i0 31.5 1.25373134328358 73 41 62.7 5 305 96 147 213 NQT94391.1 7-cyano-7-deazaguanine synthase QueC [Lentisphaerota bacterium] diamond 420 45.8 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
33123737 33123737 PRJNA737474d_S_NODE_19167_length_350_cov_1.144404_g18573_i0 PRJNA737474 19167 350 1.144404 4.005414 Lentisphaerota bacterium 1932692 Bacteria Bacteria 119 5.53e-29   NR NQT93976.1 1932692 g18573 i0 60 5.4 90 36 77.1 0 6 275 374 463 NQT93976.1 aldehyde dehydrogenase family protein [Lentisphaerota bacterium] diamond 1890 119 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;