RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA737474" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 11 ✖

bioproject 1

  • PRJNA737474 · 11 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25579194 25579194 PRJNA737474f_S_NODE_264465_length_243_cov_1.117647_g263787_i0 PRJNA737474 264465 243 1.117647 2.71588221 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 60.2 1.31e-4   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g263787 i0 94.872 0.160493827160494 39 1 16 1 175 212 1692 1730 Anas platyrhynchos papillomavirus 2, complete genome blastn 39 60.2 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2
25714986 25714986 PRJNA737474f_S_NODE_238818_length_246_cov_1.000000_g238140_i0 PRJNA737474 238818 246 1 2.46 Parvovirus emberiza5276 3117079 Viruses Viruses 75 4.74e-9   NTclustered gi|2710394588|tpg|BK066855.1| 3117079 g238140 i0 97.674 353.337398373984 43 1 31 0 188 230 5062 5104 MAG TPA_asm: Parvovirus emberiza5276 isolate Parvo5276 genomic sequence blastn 86921 75 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus emberiza5276
25722929 25722929 PRJNA737474g_S_NODE_344802_length_248_cov_5.137143_g343508_i0 PRJNA737474 344802 248 5.137143 12.74011464 Parvo-like hybrid virus UC4 1395615 Viruses Viruses 75 4.79e-9   NTclustered gi|1836405711|gb|MT138233.1| 1395615 g343508 i0 97.674 174.112903225806 43 1 17 0 191 233 4083 4041 MAG: Parvo-like hybrid virus UC4 isolate cra070par1 genomic sequence blastn 43180 75 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Lineavirales Oomyviridae Nicoomyvirus Nicoomyvirus moldensis
25724701 25724701 PRJNA737474g_S_NODE_505682_length_227_cov_603.538961_g504388_i0 PRJNA737474 505682 227 603.538961 1370.03344147 Parvovirus emberiza5276 3117079 Viruses Viruses 76.8 1.2e-9   NTclustered gi|2710394588|tpg|BK066855.1| 3117079 g504388 i0 100 187.929515418502 41 0 18 0 148 188 5064 5104 MAG TPA_asm: Parvovirus emberiza5276 isolate Parvo5276 genomic sequence blastn 42660 76.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus emberiza5276
25859425 25859425 PRJNA737474g_S_NODE_383179_length_245_cov_1.168605_g381885_i0 PRJNA737474 383179 245 1.168605 2.86308225 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 63.9 1.02e-5   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g381885 i0 100 0.138775510204082 34 0 14 0 196 229 1693 1726 Anas platyrhynchos papillomavirus 2, complete genome blastn 34 63.9 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2
25995334 25995334 PRJNA737474g_S_NODE_367212_length_246_cov_2533.289017_g365918_i0 PRJNA737474 367212 246 2533.289017 6231.89098182 Parvo-like hybrid virus UC4 1395615 Viruses Viruses 78.7 3.67e-10   NTclustered gi|1836405711|gb|MT138233.1| 1395615 g365918 i0 97.778 175.447154471545 45 1 18 0 163 207 4086 4042 MAG: Parvo-like hybrid virus UC4 isolate cra070par1 genomic sequence blastn 43160 78.7 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Lineavirales Oomyviridae Nicoomyvirus Nicoomyvirus moldensis
26037569 26037569 PRJNA737474f_S_NODE_214820_length_249_cov_0.948864_g214142_i0 PRJNA737474 214820 249 0.948864 2.36267136 root 1 Root_unresolved Root_unresolved 76.8 1.34e-9   NTclustered gi|1836405711|gb|MT138233.1| 1395615 g214142 i0 94 173.807228915663 50 3 20 0 186 235 4087 4038 MAG: Parvo-like hybrid virus UC4 isolate cra070par1 genomic sequence blastn 43278 76.8 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Lineavirales Oomyviridae Nicoomyvirus Nicoomyvirus moldensis
26253459 26253459 PRJNA737474d_S_NODE_20086_length_341_cov_2.585821_g19492_i0 PRJNA737474 20086 341 2.585821 8.81764961 Cyclovirus sp. 1983780 Viruses Viruses 52.8 0.032   NTclustered gi|2756421643|gb|PP744760.1| 1983780 g19492 i0 100 0.0821114369501466 28 0 8 0 199 226 684 711 MAG: Cyclovirus sp. isolate 257_13925 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Cyclovirus Cyclovirus sp.
26268640 26268640 PRJNA737474g_S_NODE_452926_length_238_cov_2.333333_g451632_i0 PRJNA737474 452926 238 2.333333 5.55333254 Densovirinae sp. 2030127 Viruses Viruses 326 1.14e-84   NTclustered gi|2742831632|gb|PP793484.1| 2030127 g451632 i0 97.382 2.61344537815126 191 5 80 0 48 238 837 647 MAG: Densovirinae sp. isolate 074_16821, partial genome blastn 622 326 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Protoambidensovirus Protoambidensovirus incertum5
26532418 26532418 PRJNA737474f_S_NODE_340000_length_222_cov_2.630872_g339322_i0 PRJNA737474 340000 222 2.630872 5.84053584 Parvovirus emberiza5276 3117079 Viruses Viruses 75 4.2e-9   NTclustered gi|2710394588|tpg|BK066855.1| 3117079 g339322 i0 95.745 192.513513513514 47 0 20 2 25 69 5113 5067 MAG TPA_asm: Parvovirus emberiza5276 isolate Parvo5276 genomic sequence blastn 42738 75 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus emberiza5276
26539973 26539973 PRJNA737474g_S_NODE_396040_length_244_cov_1.093567_g394746_i0 PRJNA737474 396040 244 1.093567 2.66830348 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 67.6 7.86e-7   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g394746 i0 100 0.147540983606557 36 0 15 0 183 218 1692 1727 Anas platyrhynchos papillomavirus 2, complete genome blastn 36 67.6 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;