contig_metadata
57 rows where bioproject = "PRJNA737474", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25631102 | 25631102 | PRJNA737474g_S_NODE_336145_length_249_cov_1.113636_g334851_i0 | PRJNA737474 | 336145 | 249 | 1.113636 | 2.77295364 | Bacteria | 2 | Bacteria | Bacteria | 62.1 | 3.74e-5 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g334851 | i0 | 100 | 0.397590361445783 | 33 | 0 | 13 | 0 | 30 | 62 | 868464 | 868496 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 99 | 62.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 25712055 | 25712055 | PRJNA737474e_S_NODE_4306_length_511_cov_1.694064_g3430_i0 | PRJNA737474 | 4306 | 511 | 1.694064 | 8.65666704 | Leptospira sp. severe_ | 178 | Bacteria | Bacteria | 444 | 7.06e-120 | NTclustered | gi|2120242214|gb|CP075692.1| | 2838237 | g3430 | i0 | 84.444 | 9.40900195694716 | 450 | 70 | 88 | 0 | 62 | 511 | 216614 | 216165 | Leptospira sp. severe_002 chromosome 1 | blastn | 4808 | 444 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. severe_002 | ||
| 25712134 | 25712134 | PRJNA737474e_S_NODE_5434_length_458_cov_2.714286_g4554_i0 | PRJNA737474 | 5434 | 458 | 2.714286 | 12.43142988 | Treponema sp. | 166 | Bacteria | Bacteria | 158 | 2.2899999999999998e-43 | NR | MFC2330103.1 | 166 | g4554 | i0 | 98.7 | 0.497816593886463 | 76 | 1 | 49.8 | 0 | 225 | 452 | 1 | 76 | MFC2330103.1 argininosuccinate synthase [Treponema sp.] | diamond | 228 | 158 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 25765555 | 25765555 | PRJNA737474f_S_NODE_289914_length_240_cov_110.544910_g289236_i0 | PRJNA737474 | 289914 | 240 | 110.54491 | 265.307784 | root | 1 | Root_unresolved | Root_unresolved | 67.6 | 7.71e-7 | NTclustered | gi|2592016017|gb|CP117912.1| | 29519 | g289236 | i0 | 100 | 24.6416666666667 | 36 | 0 | 15 | 0 | 150 | 185 | 20766 | 20801 | Borreliella garinii strain NG-Z6 plasmid lp17 | blastn | 5914 | 67.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 25765677 | 25765677 | PRJNA737474f_S_NODE_365202_length_210_cov_3573.861314_g364524_i0 | PRJNA737474 | 365202 | 210 | 3573.861314 | 7505.1087594 | Bacteria | 2 | Bacteria | Bacteria | 67.6 | 6.58e-7 | NTclustered | gi|2592016017|gb|CP117912.1| | 29519 | g364524 | i0 | 100 | 3.38571428571429 | 36 | 0 | 17 | 0 | 144 | 179 | 20766 | 20801 | Borreliella garinii strain NG-Z6 plasmid lp17 | blastn | 711 | 67.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 25767405 | 25767405 | PRJNA737474g_S_NODE_330738_length_250_cov_0.864407_g329444_i0 | PRJNA737474 | 330738 | 250 | 0.864407 | 2.1610175 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 65.8 | 2.91e-6 | NTclustered | gi|2592016017|gb|CP117912.1| | 29519 | g329444 | i0 | 100 | 0.552 | 35 | 0 | 14 | 0 | 201 | 235 | 20766 | 20800 | Borreliella garinii strain NG-Z6 plasmid lp17 | blastn | 138 | 65.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 25767915 | 25767915 | PRJNA737474g_S_NODE_465586_length_235_cov_3.320988_g464292_i0 | PRJNA737474 | 465586 | 235 | 3.320988 | 7.8043218 | Bacteria | 2 | Bacteria | Bacteria | 62.1 | 3.5e-5 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g464292 | i0 | 100 | 0.451063829787234 | 33 | 0 | 14 | 0 | 186 | 218 | 868496 | 868464 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 106 | 62.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 25859678 | 25859678 | PRJNA737474g_S_NODE_405067_length_243_cov_1044.882353_g403773_i0 | PRJNA737474 | 405067 | 243 | 1044.882353 | 2539.06411779 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 73.1 | 1.68e-8 | NTclustered | gi|2166239570|dbj|LC662868.1| | 1898206 | g403773 | i0 | 95.652 | 176.156378600823 | 46 | 1 | 19 | 1 | 30 | 75 | 31 | 75 | Spirochaetaceae bacterium ARSSAG-00002195 DNA, putative prophage region, clone: 00002195_pp3 | blastn | 42806 | 73.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 25860603 | 25860603 | PRJNA737474g_S_NODE_494891_length_229_cov_864.262821_g493597_i0 | PRJNA737474 | 494891 | 229 | 864.262821 | 1979.16186009 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 75 | 4.36e-9 | NTclustered | gi|2166239570|dbj|LC662868.1| | 1898206 | g493597 | i0 | 95.745 | 187.07423580786 | 47 | 1 | 21 | 1 | 154 | 200 | 76 | 31 | Spirochaetaceae bacterium ARSSAG-00002195 DNA, putative prophage region, clone: 00002195_pp3 | blastn | 42840 | 75 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 25901391 | 25901391 | PRJNA737474f_S_NODE_256427_length_244_cov_0.923977_g255749_i0 | PRJNA737474 | 256427 | 244 | 0.923977 | 2.25450388 | Bacteria | 2 | Bacteria | Bacteria | 62.1 | 3.66e-5 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g255749 | i0 | 100 | 0.405737704918033 | 33 | 0 | 14 | 0 | 15 | 47 | 868464 | 868496 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 99 | 62.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 25901410 | 25901410 | PRJNA737474f_S_NODE_269739_length_243_cov_0.788235_g269061_i0 | PRJNA737474 | 269739 | 243 | 0.788235 | 1.91541105 | Bacteria | 2 | Bacteria | Bacteria | 62.1 | 3.64e-5 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g269061 | i0 | 100 | 0.423868312757202 | 33 | 0 | 14 | 0 | 24 | 56 | 868464 | 868496 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 103 | 62.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 25903401 | 25903401 | PRJNA737474g_S_NODE_356643_length_247_cov_3.827586_g355349_i0 | PRJNA737474 | 356643 | 247 | 3.827586 | 9.45413742 | Borrelia | 138 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2668652688|gb|CP129313.1| | 142 | g355349 | i0 | 100 | 0.226720647773279 | 28 | 0 | 11 | 0 | 185 | 212 | 11682 | 11655 | Borrelia turicatae strain BTCAM1 plasmid lp32, complete sequence | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borrelia | Borrelia turicatae | ||
| 25997355 | 25997355 | PRJNA737474g_S_NODE_589900_length_206_cov_47.180451_g588606_i0 | PRJNA737474 | 589900 | 206 | 47.180451 | 97.19172906 | Borreliella garinii | 29519 | Bacteria | Bacteria | 65.8 | 2.31e-6 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g588606 | i0 | 100 | 0.62621359223301 | 35 | 0 | 17 | 0 | 24 | 58 | 868464 | 868498 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 129 | 65.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 26036803 | 26036803 | PRJNA737474e_S_NODE_14796_length_320_cov_1.817814_g13914_i0 | PRJNA737474 | 14796 | 320 | 1.817814 | 5.8170048 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 81.6 | 2.01e-15 | NR | MCF0237448.1 | 2791017 | g13914 | i0 | 46 | 2.925 | 100 | 39 | 87.2 | 4 | 42 | 320 | 225 | 316 | MCF0237448.1 family 43 glycosylhydrolase [Sphaerochaetaceae bacterium] | diamond | 936 | 81.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 26112450 | 26112450 | PRJNA737474b_S_NODE_17941_length_378_cov_3.836066_g16902_i0 | PRJNA737474 | 17941 | 378 | 3.836066 | 14.50032948 | Treponema endosymbiont of Eucomonympha sp. | 1580831 | Bacteria | Bacteria | 228 | 1.52e-74 | NR | WP_187152238.1 | 1580831 | g16902 | i0 | 93.9 | 0.912698412698413 | 115 | 7 | 91.3 | 0 | 32 | 376 | 7 | 121 | WP_187152238.1 alginate export family protein, partial [Treponema endosymbiont of Eucomonympha sp.] | diamond | 345 | 228 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema endosymbiont of Eucomonympha sp. | ||
| 26175803 | 26175803 | PRJNA737474g_S_NODE_346829_length_248_cov_1.200000_g345535_i0 | PRJNA737474 | 346829 | 248 | 1.2 | 2.976 | Bacteria | 2 | Bacteria | Bacteria | 62.1 | 3.73e-5 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g345535 | i0 | 100 | 0.399193548387097 | 33 | 0 | 13 | 0 | 197 | 229 | 868496 | 868464 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 99 | 62.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 26253014 | 26253014 | PRJNA737474d_S_NODE_11510_length_453_cov_7.692105_g10925_i0 | PRJNA737474 | 11510 | 453 | 7.692105 | 34.84523565 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 55.1 | 1.75e-5 | NR | MEI8096416.1 | 2026792 | g10925 | i0 | 27.5 | 0.721854304635762 | 109 | 67 | 64.2 | 1 | 7 | 297 | 670 | 778 | MEI8096416.1 fibronectin type III domain-containing protein [Spirochaetales bacterium] | diamond | 327 | 55.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 26268367 | 26268367 | PRJNA737474g_S_NODE_430734_length_241_cov_824.166667_g429440_i0 | PRJNA737474 | 430734 | 241 | 824.166667 | 1986.24166747 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 75 | 4.63e-9 | NTclustered | gi|2166239570|dbj|LC662868.1| | 1898206 | g429440 | i0 | 97.674 | 176.44398340249 | 43 | 1 | 18 | 0 | 166 | 208 | 76 | 34 | Spirochaetaceae bacterium ARSSAG-00002195 DNA, putative prophage region, clone: 00002195_pp3 | blastn | 42523 | 75 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 26269583 | 26269583 | PRJNA737474g_S_NODE_580630_length_208_cov_10476.925926_g579336_i0 | PRJNA737474 | 580630 | 208 | 10476.925926 | 21792.00592608 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 76.8 | 1.08e-9 | NTclustered | gi|2166239570|dbj|LC662868.1| | 1898206 | g579336 | i0 | 95.833 | 206.548076923077 | 48 | 1 | 23 | 1 | 130 | 177 | 77 | 31 | Spirochaetaceae bacterium ARSSAG-00002195 DNA, putative prophage region, clone: 00002195_pp3 | blastn | 42962 | 76.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 26312244 | 26312244 | PRJNA737474g_S_NODE_572958_length_211_cov_5.000000_g571664_i0 | PRJNA737474 | 572958 | 211 | 5 | 10.55 | Bacteria | 2 | Bacteria | Bacteria | 63.9 | 8.56e-6 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g571664 | i0 | 100 | 0.483412322274882 | 34 | 0 | 16 | 0 | 17 | 50 | 868463 | 868496 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 102 | 63.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 26448002 | 26448002 | PRJNA737474g_S_NODE_41247_length_446_cov_12.394102_g39957_i0 | PRJNA737474 | 41247 | 446 | 12.394102 | 55.27769492 | Bacteria | 2 | Bacteria | Bacteria | 62.1 | 7.17e-5 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g39957 | i0 | 100 | 0.291479820627803 | 33 | 0 | 7 | 0 | 412 | 444 | 868496 | 868464 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 130 | 62.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 26529692 | 26529692 | PRJNA737474f_S_NODE_134304_length_273_cov_1.985000_g133626_i0 | PRJNA737474 | 134304 | 273 | 1.985 | 5.41905 | Leptospira sp. severe_ | 178 | Bacteria | Bacteria | 255 | 1.7800000000000001e-63 | NTclustered | gi|2120242214|gb|CP075692.1| | 2838237 | g133626 | i0 | 85.656 | 40.8461538461538 | 244 | 33 | 89 | 2 | 14 | 256 | 18030 | 18272 | Leptospira sp. severe_002 chromosome 1 | blastn | 11151 | 255 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. severe_002 | ||
| 26533474 | 26533474 | PRJNA737474f_S_NODE_63640_length_321_cov_2.435484_g62962_i0 | PRJNA737474 | 63640 | 321 | 2.435484 | 7.81790364 | Leptospira noguchii | 28182 | Bacteria | Bacteria | 119 | 2.93e-22 | NTclustered | gi|2218393545|gb|CP091953.1| | 28182 | g62962 | i0 | 83.077 | 1.21495327102804 | 130 | 22 | 40 | 0 | 74 | 203 | 3910566 | 3910437 | Leptospira noguchii strain IP1605021 chromosome 1, complete sequence | blastn | 390 | 119 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira noguchii | ||
| 26541554 | 26541554 | PRJNA737474g_S_NODE_582248_length_208_cov_1048.725926_g580954_i0 | PRJNA737474 | 582248 | 208 | 1048.725926 | 2181.34992608 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 75 | 3.89e-9 | NTclustered | gi|2166239570|dbj|LC662868.1| | 1898206 | g580954 | i0 | 95.745 | 206.903846153846 | 47 | 1 | 23 | 1 | 133 | 179 | 76 | 31 | Spirochaetaceae bacterium ARSSAG-00002195 DNA, putative prophage region, clone: 00002195_pp3 | blastn | 43036 | 75 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 26583432 | 26583432 | PRJNA737474g_S_NODE_297736_length_254_cov_1.000000_g296442_i0 | PRJNA737474 | 297736 | 254 | 1 | 2.54 | Bacteria | 2 | Bacteria | Bacteria | 63.9 | 1.07e-5 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g296442 | i0 | 100 | 0.767716535433071 | 34 | 0 | 13 | 0 | 29 | 62 | 868463 | 868496 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 195 | 63.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 26583718 | 26583718 | PRJNA737474g_S_NODE_358176_length_247_cov_1.287356_g356882_i0 | PRJNA737474 | 358176 | 247 | 1.287356 | 3.17976932 | Bacteria | 2 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2592017114|gb|CP117894.1| | 29519 | g356882 | i0 | 100 | 0.340080971659919 | 28 | 0 | 11 | 0 | 220 | 247 | 868496 | 868469 | Borreliella garinii strain 17-54Z3 chromosome | blastn | 84 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 32919634 | 32919634 | PRJNA737474f_S_NODE_246633_length_245_cov_1.139535_g245955_i0 | PRJNA737474 | 246633 | 245 | 1.139535 | 2.79186075 | Treponema sp. | 166 | Bacteria | Bacteria | 52.4 | 1.21e-5 | NR | HBG64917.1 | 166 | g245955 | i0 | 42.6 | 1.71428571428571 | 61 | 34 | 73.5 | 1 | 214 | 35 | 78 | 138 | HBG64917.1 glycosyl transferase [Treponema sp.] | diamond | 420 | 52.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 32920646 | 32920646 | PRJNA737474g_S_NODE_36209_length_474_cov_9.109726_g34922_i0 | PRJNA737474 | 36209 | 474 | 9.109726 | 43.18010124 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 65.9 | 3.55e-9 | NR | MEW5816844.1 | 2202144 | g34922 | i0 | 44.4 | 0.39873417721519 | 63 | 31 | 39.9 | 1 | 11 | 199 | 538 | 596 | MEW5816844.1 alpha-amylase family glycosyl hydrolase [Spirochaetota bacterium] | diamond | 189 | 65.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 32924688 | 32924688 | PRJNA737474g_S_NODE_279577_length_257_cov_1.804348_g278283_i0 | PRJNA737474 | 279577 | 257 | 1.804348 | 4.63717436 | Pleomorphochaeta | 1920504 | Bacteria | Bacteria | 106 | 6.870000000000001e-27 | NR | MDC7244240.1 | 1920505 | g278283 | i0 | 59 | 1.93774319066148 | 83 | 33 | 95.7 | 1 | 250 | 5 | 89 | 171 | MDC7244240.1 phosphoribosyltransferase [Pleomorphochaeta sp.] | diamond | 498 | 107 | 0.990654205607477 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Pleomorphochaeta | Pleomorphochaeta sp. | ||
| 32937813 | 32937813 | PRJNA737474g_S_NODE_356785_length_247_cov_2.149425_g355491_i0 | PRJNA737474 | 356785 | 247 | 2.149425 | 5.30907975 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 47 | 0.00108 | NR | MCB1169781.1 | 2026757 | g355491 | i0 | 35.4 | 2.96356275303644 | 79 | 42 | 96 | 2 | 9 | 245 | 169 | 238 | MCB1169781.1 dioxygenase [Leptospiraceae bacterium] | diamond | 732 | 47 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 32941470 | 32941470 | PRJNA737474b_S_NODE_25329_length_318_cov_9.824490_g24290_i0 | PRJNA737474 | 25329 | 318 | 9.82449 | 31.2418782 | Bacteria | 2 | Bacteria | Bacteria | 79 | 1.76e-14 | NR | MDF1567988.1 | 1898206 | g24290 | i0 | 85 | 4.52830188679245 | 40 | 6 | 37.7 | 0 | 297 | 178 | 592 | 631 | MDF1567988.1 formate--tetrahydrofolate ligase [Spirochaetaceae bacterium] | diamond | 1440 | 79.7 | 0.991217063989962 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 32953111 | 32953111 | PRJNA737474c_S_NODE_4826_length_489_cov_1.932692_g3999_i0 | PRJNA737474 | 4826 | 489 | 1.932692 | 9.45086388 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 173 | 3.3e-47 | NR | MCF0237448.1 | 2791017 | g3999 | i0 | 50.9 | 0.975460122699387 | 159 | 78 | 97.5 | 0 | 484 | 8 | 360 | 518 | MCF0237448.1 family 43 glycosylhydrolase [Sphaerochaetaceae bacterium] | diamond | 477 | 173 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 32953679 | 32953679 | PRJNA737474e_S_NODE_34210_length_235_cov_3.716049_g33328_i0 | PRJNA737474 | 34210 | 235 | 3.716049 | 8.73271515 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 108 | 1.64e-25 | NR | MDD7200396.1 | 2026792 | g33328 | i0 | 64.1 | 1.99148936170213 | 78 | 25 | 95.7 | 1 | 2 | 226 | 102 | 179 | MDD7200396.1 family 43 glycosylhydrolase [Spirochaetales bacterium] | diamond | 468 | 108 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 32958909 | 32958909 | PRJNA737474f_S_NODE_28674_length_401_cov_1.832317_g27997_i0 | PRJNA737474 | 28674 | 401 | 1.832317 | 7.34759117 | root | 1 | Root_unresolved | Root_unresolved | 112 | 5.8200000000000006e-27 | NR | MCE9502068.1 | 178 | g27997 | i0 | 57.7 | 1.76558603491272 | 78 | 33 | 58.4 | 0 | 399 | 166 | 264 | 341 | MCE9502068.1 cyclopropane-fatty-acyl-phospholipid synthase family protein [Leptospira sp.] | diamond | 708 | 112 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. | ||
| 32970242 | 32970242 | PRJNA737474c_S_NODE_30274_length_232_cov_2.893082_g29443_i0 | PRJNA737474 | 30274 | 232 | 2.893082 | 6.71195024 | Treponema endosymbiont of Eucomonympha sp. | 1580831 | Bacteria | Bacteria | 137 | 1.26e-39 | NR | WP_187149558.1 | 1580831 | g29443 | i0 | 98.5 | 0.853448275862069 | 66 | 1 | 85.3 | 0 | 200 | 3 | 9 | 74 | WP_187149558.1 alginate export family protein, partial [Treponema endosymbiont of Eucomonympha sp.] | diamond | 198 | 137 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema endosymbiont of Eucomonympha sp. | ||
| 32970889 | 32970889 | PRJNA737474f_S_NODE_13226_length_554_cov_3.222453_g12561_i0 | PRJNA737474 | 13226 | 554 | 3.222453 | 17.85238962 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 115 | 1.38e-26 | NR | MFA6688828.1 | 2791017 | g12561 | i0 | 55.1 | 1.07761732851986 | 98 | 44 | 53.1 | 0 | 1 | 294 | 348 | 445 | MFA6688828.1 diaminobutyrate--2-oxoglutarate transaminase [Sphaerochaetaceae bacterium] | diamond | 597 | 115 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 32970935 | 32970935 | PRJNA737474f_S_NODE_146474_length_268_cov_1.287179_g145796_i0 | PRJNA737474 | 146474 | 268 | 1.287179 | 3.44963972 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 84.3 | 4.59e-17 | NR | MBN2509503.1 | 2026792 | g145796 | i0 | 44.9 | 1.58955223880597 | 69 | 38 | 77.2 | 0 | 207 | 1 | 133 | 201 | MBN2509503.1 zinc-ribbon domain-containing protein [Spirochaetales bacterium] | diamond | 426 | 84.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 32976234 | 32976234 | PRJNA737474g_S_NODE_394274_length_244_cov_1.350877_g392980_i0 | PRJNA737474 | 394274 | 244 | 1.350877 | 3.29613988 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 48.5 | 2.45e-4 | NR | MCL2044507.1 | 166 | g392980 | i0 | 45.9 | 6.34426229508197 | 61 | 30 | 75 | 1 | 30 | 212 | 165 | 222 | MCL2044507.1 HAD family hydrolase [Treponema sp.] | diamond | 1548 | 48.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 33004230 | 33004230 | PRJNA737474c_S_NODE_8683_length_374_cov_4.697674_g7852_i0 | PRJNA737474 | 8683 | 374 | 4.697674 | 17.56930076 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 156 | 1.08e-41 | NR | MDD7200396.1 | 2026792 | g7852 | i0 | 71.4 | 3.44117647058824 | 105 | 30 | 84.2 | 0 | 52 | 366 | 32 | 136 | MDD7200396.1 family 43 glycosylhydrolase [Spirochaetales bacterium] | diamond | 1287 | 156 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 33005397 | 33005397 | PRJNA737474f_S_NODE_92403_length_296_cov_1.197309_g91725_i0 | PRJNA737474 | 92403 | 296 | 1.197309 | 3.54403464 | Candidatus Gallitreponema excrementavium | 2840840 | Bacteria | Bacteria | 46.2 | 5.69e-4 | NR | MBO8458629.1 | 2840840 | g91725 | i0 | 42.6 | 0.547297297297297 | 54 | 30 | 54.7 | 1 | 14 | 175 | 36 | 88 | MBO8458629.1 30S ribosomal protein S15 [Candidatus Gallitreponema excrementavium] | diamond | 162 | 46.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Candidatus Gallitreponema | Candidatus Gallitreponema excrementavium | |||
| 33009946 | 33009946 | PRJNA737474f_S_NODE_141131_length_270_cov_2.304569_g140453_i0 | PRJNA737474 | 141131 | 270 | 2.304569 | 6.2223363 | Bacteria candidate phyla | 1783234 | Bacteria | Bacteria | 80.9 | 2.72e-16 | NR | WP_012671820.1 | 159 | g140453 | i0 | 56.2 | 6.72222222222222 | 73 | 31 | 81.1 | 1 | 258 | 40 | 153 | 224 | WP_012671820.1 pseudouridine synthase [Brachyspira hyodysenteriae] | diamond | 1815 | 81.6 | 0.991421568627451 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 33021381 | 33021381 | PRJNA737474d_S_NODE_17092_length_371_cov_3.184564_g16498_i0 | PRJNA737474 | 17092 | 371 | 3.184564 | 11.81473244 | Treponema endosymbiont of Eucomonympha sp. | 1580831 | Bacteria | Bacteria | 157 | 1.19e-46 | NR | WP_228378758.1 | 1580831 | g16498 | i0 | 97.6 | 0.671159029649596 | 83 | 2 | 67.1 | 0 | 122 | 370 | 1 | 83 | WP_228378758.1 DoxX family protein, partial [Treponema endosymbiont of Eucomonympha sp.] | diamond | 249 | 157 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema endosymbiont of Eucomonympha sp. | ||
| 33022411 | 33022411 | PRJNA737474f_S_NODE_42004_length_357_cov_1.447183_g41326_i0 | PRJNA737474 | 42004 | 357 | 1.447183 | 5.16644331 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 87 | 5.9e-18 | NR | MFC1669629.1 | 2202144 | g41326 | i0 | 39 | 0.991596638655462 | 118 | 67 | 97.5 | 2 | 352 | 5 | 85 | 199 | MFC1669629.1 SDR family NAD(P)-dependent oxidoreductase [Spirochaetota bacterium] | diamond | 354 | 87 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 33023037 | 33023037 | PRJNA737474g_S_NODE_220980_length_271_cov_2.035354_g219686_i0 | PRJNA737474 | 220980 | 271 | 2.035354 | 5.51580934 | Spirochaetes bacterium GWB1_36_13 | 1802174 | Bacteria | Bacteria | 68.9 | 3.21e-11 | NR | OHD11784.1 | 1802174 | g219686 | i0 | 33 | 5.87822878228782 | 91 | 60 | 99.6 | 1 | 2 | 271 | 489 | 579 | OHD11784.1 MAG: hypothetical protein A2Y41_09870 [Spirochaetes bacterium GWB1_36_13] | diamond | 1593 | 68.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetes bacterium GWB1_36_13 | ||||||
| 33027083 | 33027083 | PRJNA737474f_S_NODE_159172_length_263_cov_2.026316_g158494_i0 | PRJNA737474 | 159172 | 263 | 2.026316 | 5.32921108 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 78.6 | 1.18e-14 | NR | HQH99510.1 | 2202144 | g158494 | i0 | 65.3 | 2.21292775665399 | 49 | 17 | 55.9 | 0 | 247 | 101 | 733 | 781 | HQH99510.1 PEP/pyruvate-binding domain-containing protein [Spirochaetota bacterium] | diamond | 582 | 78.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 33044092 | 33044092 | PRJNA737474f_S_NODE_22372_length_437_cov_2.802198_g21695_i0 | PRJNA737474 | 22372 | 437 | 2.802198 | 12.24560526 | Pleomorphochaeta | 1920504 | Bacteria | Bacteria | 79.7 | 1.88e-15 | NR | MDC7244240.1 | 1920505 | g21695 | i0 | 55.4 | 1.33180778032037 | 65 | 28 | 43.9 | 1 | 324 | 133 | 107 | 171 | MDC7244240.1 phosphoribosyltransferase [Pleomorphochaeta sp.] | diamond | 582 | 80.5 | 0.990062111801242 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Pleomorphochaeta | Pleomorphochaeta sp. | ||
| 33044175 | 33044175 | PRJNA737474f_S_NODE_66716_length_318_cov_1.065306_g66038_i0 | PRJNA737474 | 66716 | 318 | 1.065306 | 3.38767308 | Leptospira | 171 | Bacteria | Bacteria | 123 | 1.72e-33 | NR | WP_135760341.1 | 1193500 | g66038 | i0 | 79.2 | 2.71698113207547 | 72 | 15 | 67.9 | 0 | 94 | 309 | 43 | 114 | WP_135760341.1 VOC family protein [Leptospira idonii] | diamond | 864 | 124 | 0.991935483870968 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira idonii | ||
| 33044372 | 33044372 | PRJNA737474g_S_NODE_42340_length_441_cov_1.967391_g41050_i0 | PRJNA737474 | 42340 | 441 | 1.967391 | 8.67619431 | PVC group | 1783257 | Bacteria | Bacteria | 45.8 | 0.0228 | NR | WP_074931079.1 | 163 | g41050 | i0 | 21.8 | 6.22448979591837 | 133 | 103 | 90.5 | 1 | 9 | 407 | 36 | 167 | WP_074931079.1 ABC transporter ATP-binding protein [Treponema bryantii] | diamond | 2745 | 46.2 | 0.991341991341991 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 33057573 | 33057573 | PRJNA737474g_S_NODE_60157_length_384_cov_1.073955_g58864_i0 | PRJNA737474 | 60157 | 384 | 1.073955 | 4.1239872 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 169 | 2.23e-46 | NR | MCF0237448.1 | 2791017 | g58864 | i0 | 58.3 | 0.9921875 | 127 | 53 | 99.2 | 0 | 382 | 2 | 285 | 411 | MCF0237448.1 family 43 glycosylhydrolase [Sphaerochaetaceae bacterium] | diamond | 381 | 169 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 33073258 | 33073258 | PRJNA737474f_S_NODE_229165_length_247_cov_1.327586_g228487_i0 | PRJNA737474 | 229165 | 247 | 1.327586 | 3.27913742 | Brachyspira catarrhinii | 2528966 | Bacteria | Bacteria | 46.2 | 0.0023 | NR | WP_137997320.1 | 2528966 | g228487 | i0 | 39 | 0.995951417004049 | 82 | 47 | 96 | 1 | 237 | 1 | 123 | 204 | WP_137997320.1 hypothetical protein [Brachyspira catarrhinii] | diamond | 246 | 46.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira catarrhinii | ||
| 33074253 | 33074253 | PRJNA737474g_S_NODE_318485_length_251_cov_0.865169_g317191_i0 | PRJNA737474 | 318485 | 251 | 0.865169 | 2.17157419 | Leptospira ognonensis | 2484945 | Bacteria | Bacteria | 56.6 | 5.05e-7 | NR | WP_135625295.1 | 2484945 | g317191 | i0 | 36.9 | 3.14342629482072 | 84 | 40 | 86.1 | 2 | 238 | 23 | 198 | 280 | WP_135625295.1 NHL repeat-containing protein [Leptospira ognonensis] | diamond | 789 | 56.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira ognonensis | ||
| 33095309 | 33095309 | PRJNA737474f_S_NODE_18614_length_472_cov_1.736842_g17939_i0 | PRJNA737474 | 18614 | 472 | 1.736842 | 8.19789424 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 60.1 | 3.4e-7 | NR | PKL30934.1 | 2013833 | g17939 | i0 | 31.7 | 3.05720338983051 | 123 | 76 | 77.5 | 4 | 77 | 442 | 62 | 177 | PKL30934.1 MAG: hypothetical protein CVV45_15785 [Spirochaetae bacterium HGW-Spirochaetae-10] | diamond | 1443 | 60.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetae bacterium HGW-Spirochaetae-10 | ||||||
| 33124405 | 33124405 | PRJNA737474f_S_NODE_185487_length_255_cov_0.840659_g184809_i0 | PRJNA737474 | 185487 | 255 | 0.840659 | 2.14368045 | Leptospira sp. | 178 | Bacteria | Bacteria | 52 | 2.28e-5 | NR | MCZ8157590.1 | 178 | g184809 | i0 | 35.4 | 0.764705882352941 | 65 | 41 | 76.5 | 1 | 60 | 254 | 81 | 144 | MCZ8157590.1 DASS family sodium-coupled anion symporter [Leptospira sp.] | diamond | 195 | 52 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. | ||
| 33124799 | 33124799 | PRJNA737474f_S_NODE_64575_length_320_cov_1.639676_g63897_i0 | PRJNA737474 | 64575 | 320 | 1.639676 | 5.2469632 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 61.6 | 2.11e-8 | NR | HOX48843.1 | 2026792 | g63897 | i0 | 60 | 1.153125 | 50 | 20 | 46.9 | 0 | 270 | 121 | 174 | 223 | HOX48843.1 ankyrin repeat domain-containing protein [Spirochaetales bacterium] | diamond | 369 | 61.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 33140587 | 33140587 | PRJNA737474c_S_NODE_22071_length_264_cov_2.633508_g21240_i0 | PRJNA737474 | 22071 | 264 | 2.633508 | 6.95246112 | Pleomorphochaeta sp. | 1920505 | Bacteria | Bacteria | 63.2 | 3.06e-9 | NR | MDC7243778.1 | 1920505 | g21240 | i0 | 44.9 | 0.886363636363636 | 78 | 41 | 88.6 | 1 | 2 | 235 | 338 | 413 | MDC7243778.1 hypothetical protein [Pleomorphochaeta sp.] | diamond | 234 | 63.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Pleomorphochaeta | Pleomorphochaeta sp. | ||
| 33159232 | 33159232 | PRJNA737474g_S_NODE_196856_length_279_cov_0.932039_g195562_i0 | PRJNA737474 | 196856 | 279 | 0.932039 | 2.60038881 | Treponema berlinense | 225004 | Bacteria | Bacteria | 51.6 | 4.38e-5 | NR | WP_078931423.1 | 225004 | g195562 | i0 | 38.1 | 1.80645161290323 | 84 | 45 | 87.1 | 3 | 23 | 265 | 525 | 604 | WP_078931423.1 DNA polymerase I [Treponema berlinense] | diamond | 504 | 51.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema berlinense | ||
| 33163374 | 33163374 | PRJNA737474f_S_NODE_153800_length_265_cov_2.182292_g153122_i0 | PRJNA737474 | 153800 | 265 | 2.182292 | 5.7830738 | Bacteria | 2 | Bacteria | Bacteria | 55.5 | 1.21e-6 | NR | MCK4542822.1 | 2026792 | g153122 | i0 | 42.6 | 6.24905660377359 | 61 | 35 | 69.1 | 0 | 242 | 60 | 18 | 78 | MCK4542822.1 DnaJ domain-containing protein [Spirochaetales bacterium] | diamond | 1656 | 55.8 | 0.99462365591397806 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;