RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA737474", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_kingdom = "Pseudomonadati"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Pseudomonadati · 4 ✖

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 4 ✖

bioproject 1

  • PRJNA737474 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26039211 26039211 PRJNA737474g_S_NODE_264676_length_260_cov_1109.518717_g263382_i0 PRJNA737474 264676 260 1109.518717 2884.7486642 root 1 Root_unresolved Root_unresolved 75 5.06e-9   NTclustered gi|2166239796|dbj|LC662883.1| 2528274 g263382 i0 100 163.365384615385 40 0 15 0 38 77 42 81 Candidatus Tectomicrobia bacterium ARSSAG-00001703 DNA, putative prophage region, clone: 00001703_pp1 blastn 42475 75 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
26118030 26118030 PRJNA737474d_S_NODE_34701_length_259_cov_1.586022_g34107_i0 PRJNA737474 34701 259 1.586022 4.10779698 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 122 2.92e-30   NR HEX9871836.1 2528274 g34107 i0 71.4 0.972972972972973 84 24 97.3 0 254 3 256 339 HEX9871836.1 ABC transporter substrate-binding protein [Candidatus Tectimicrobiota bacterium] diamond 252 122 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
33073532 33073532 PRJNA737474f_S_NODE_62925_length_322_cov_1.477912_g62247_i0 PRJNA737474 62925 322 1.477912 4.75887664 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 47 0.00282   NR HEY7490231.1 2528274 g62247 i0 50 0.372670807453416 40 19 37.3 1 4 123 321 359 HEY7490231.1 acyl-CoA desaturase [Candidatus Tectimicrobiota bacterium] diamond 120 47 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
33158694 33158694 PRJNA737474f_S_NODE_42352_length_356_cov_2.537102_g41674_i0 PRJNA737474 42352 356 2.537102 9.03208312 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 51.6 7.35e-5   NR HEY5869581.1 2528274 g41674 i0 37 1.19662921348315 73 43 61.5 1 344 126 85 154 HEY5869581.1 hypothetical protein [Candidatus Tectimicrobiota bacterium] diamond 426 51.6 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;