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contig_metadata

25 rows where bioproject = "PRJNA737474", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 25 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 25 ✖

bioproject 1

  • PRJNA737474 · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25571069 25571069 PRJNA737474c_S_NODE_19081_length_279_cov_3.281553_g18250_i0 PRJNA737474 19081 279 3.281553 9.15553287 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 65.8 3.3e-6   NTclustered gi|2107779373|gb|CP070829.1| 2448054 g18250 i0 100 20.9641577060932 35 0 13 0 27 61 4018085 4018119 MAG: Gemmatimonadales bacterium isolate bin109 chromosome blastn 5849 65.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
25723012 25723012 PRJNA737474g_S_NODE_348986_length_248_cov_0.880000_g347692_i0 PRJNA737474 348986 248 0.88 2.1824 Pseudomonadati 3379134 Bacteria Bacteria 110 1.13e-26   NR MEO8000078.1 2026741 g347692 i0 83.6 9.41129032258065 67 11 81 0 214 14 34 100 MEO8000078.1 cystathionine gamma-synthase [Gemmatimonadaceae bacterium] diamond 2334 110 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
25986144 25986144 PRJNA737474f_S_NODE_171532_length_259_cov_1.166667_g170854_i0 PRJNA737474 171532 259 1.166667 3.02166753 Gemmatirosa kalamazoonensis 861299 Bacteria Bacteria 54.7 0.007   NTclustered gi|575456455|gb|CP007128.1| 861299 g170854 i0 96.97 0.127413127413127 33 0 13 1 197 229 5009523 5009492 Gemmatirosa kalamazoonesis strain KBS708, complete genome blastn 33 54.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatirosa Gemmatirosa kalamazoonensis
26268483 26268483 PRJNA737474g_S_NODE_439374_length_241_cov_0.904762_g438080_i0 PRJNA737474 439374 241 0.904762 2.18047642 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 119 2.11e-22   NTclustered gi|2874253728|emb|OY969570.1| 412054 g438080 i0 80.745 45.8215767634855 161 24 65 6 14 169 3088166 3088008 MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 blastn 11043 119 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
26270547 26270547 PRJNA737474g_S_NODE_84774_length_343_cov_1.825926_g83480_i0 PRJNA737474 84774 343 1.825926 6.26292618 FCB group 1783270 Bacteria Bacteria 104 2.9099999999999996e-23   NR MBA2669744.1 2026742 g83480 i0 52.4 9.91836734693878 103 48 89.2 1 22 327 108 210 MBA2669744.1 protein kinase [Gemmatimonadota bacterium] diamond 3402 105 0.990476190476191 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
26522419 26522419 PRJNA737474b_S_NODE_44680_length_246_cov_0.768786_g43641_i0 PRJNA737474 44680 246 0.768786 1.89121356 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 70.9 3.82e-13   NR HEU4640827.1 2026741 g43641 i0 78.9 0.841463414634146 38 8 46.3 0 132 245 42 79 HEU4640827.1 NIPSNAP family protein [Gemmatimonadaceae bacterium] diamond 207 70.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32919399 32919399 PRJNA737474f_S_NODE_133201_length_274_cov_1.034826_g132523_i0 PRJNA737474 133201 274 1.034826 2.83542324 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 43.9 0.0109   NR HET9798782.1 2026741 g132523 i0 32.2 0.952554744525547 87 50 93.1 4 10 264 79 158 HET9798782.1 hypothetical protein [Gemmatimonadaceae bacterium] diamond 261 43.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32953358 32953358 PRJNA737474d_S_NODE_28218_length_288_cov_2.195349_g27624_i0 PRJNA737474 28218 288 2.195349 6.32260512 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 43.1 0.0453   NR HYD51287.1 2026741 g27624 i0 32.5 0.802083333333333 77 52 80.2 0 28 258 37 113 HYD51287.1 class I SAM-dependent RNA methyltransferase [Gemmatimonadaceae bacterium] diamond 231 43.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32954094 32954094 PRJNA737474f_S_NODE_264930_length_243_cov_1.011765_g264252_i0 PRJNA737474 264930 243 1.011765 2.45858895 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 148 1.06e-43   NR MEW5919030.1 2026742 g264252 i0 93.5 0.950617283950617 77 5 95.1 0 232 2 58 134 MEW5919030.1 salicylate hydroxylase [Gemmatimonadota bacterium] diamond 231 148 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32954682 32954682 PRJNA737474g_S_NODE_172746_length_287_cov_1.705607_g171452_i0 PRJNA737474 172746 287 1.705607 4.89509209 Longimicrobiaceae bacterium 3047548 Bacteria Bacteria 44.3 0.0134   NR HEX5724568.1 3047548 g171452 i0 36.3 0.951219512195122 91 41 80.5 4 22 252 23 110 HEX5724568.1 hypothetical protein [Longimicrobiaceae bacterium] diamond 273 44.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae   Longimicrobiaceae bacterium
32954893 32954893 PRJNA737474g_S_NODE_252146_length_263_cov_1.700000_g250852_i0 PRJNA737474 252146 263 1.7 4.471 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 54.7 2.97e-6   NR HZI29697.1 2026741 g250852 i0 39.4 4.6425855513308 71 43 81 0 40 252 626 696 HZI29697.1 protein kinase [Gemmatimonadaceae bacterium] diamond 1221 54.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32958971 32958971 PRJNA737474f_S_NODE_7890_length_733_cov_2.553030_g7297_i0 PRJNA737474 7890 733 2.55303 18.7137099 Pseudomonadati 3379134 Bacteria Bacteria 162 8.64e-46   NR HEY9228765.1 2026741 g7297 i0 75 1.64529331514325 100 25 40.9 0 308 607 97 196 HEY9228765.1 SMC-Scp complex subunit ScpB [Gemmatimonadaceae bacterium] diamond 1206 163 0.993865030674847 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32970931 32970931 PRJNA737474f_S_NODE_14578_length_528_cov_4.123077_g13910_i0 PRJNA737474 14578 528 4.123077 21.76984656 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 144 2.7599999999999997e-37   NR HUP00018.1 2026742 g13910 i0 57.7 1.35795454545455 123 48 69.9 2 2 370 328 446 HUP00018.1 allantoinase AllB [Gemmatimonadota bacterium] diamond 717 144 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32993077 32993077 PRJNA737474g_S_NODE_102923_length_325_cov_1.857143_g101629_i0 PRJNA737474 102923 325 1.857143 6.03571475 Pseudomonadati 3379134 Bacteria Bacteria 107 7.59e-25   NR MBA2669828.1 2026742 g101629 i0 61.9 7.07076923076923 84 32 77.5 0 15 266 82 165 MBA2669828.1 threonine ammonia-lyase [Gemmatimonadota bacterium] diamond 2298 107 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
33022065 33022065 PRJNA737474f_S_NODE_16452_length_499_cov_1.326291_g15779_i0 PRJNA737474 16452 499 1.326291 6.61819209 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 94.7 4.48e-19   NR HET6616550.1 2026742 g15779 i0 39.5 0.715430861723447 119 71 70.9 1 143 496 649 767 HET6616550.1 isoleucine--tRNA ligase [Gemmatimonadota bacterium] diamond 357 94.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
33027274 33027274 PRJNA737474g_S_NODE_20444_length_667_cov_2.309764_g19232_i0 PRJNA737474 20444 667 2.309764 15.40612588 Pseudomonadati 3379134 Bacteria Bacteria 108 2.72e-23   NR HEX8696136.1 2029185 g19232 i0 58.3 0.926536731634183 108 45 48.6 0 332 9 23 130 HEX8696136.1 hypothetical protein [Longimicrobium sp.] diamond 618 108 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
33056224 33056224 PRJNA737474f_S_NODE_215101_length_249_cov_0.880682_g214423_i0 PRJNA737474 215101 249 0.880682 2.19289818 Longimicrobiaceae bacterium 3047548 Bacteria Bacteria 51.2 3.2e-5   NR HLL46508.1 3047548 g214423 i0 40 2.57831325301205 65 36 78.3 3 2 196 80 141 HLL46508.1 metallophosphoesterase [Longimicrobiaceae bacterium] diamond 642 51.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae   Longimicrobiaceae bacterium
33061249 33061249 PRJNA737474g_S_NODE_231909_length_268_cov_4.020513_g230615_i0 PRJNA737474 231909 268 4.020513 10.77497484 Pseudomonadati 3379134 Bacteria Bacteria 118 9.279999999999999e-30   NR MFL5561389.1 2026741 g230615 i0 78.9 3.13432835820896 71 15 79.5 0 233 21 6 76 MFL5561389.1 NAD-dependent epimerase/dehydratase family protein [Gemmatimonadaceae bacterium] diamond 840 119 0.991596638655462 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
33107519 33107519 PRJNA737474f_S_NODE_272526_length_242_cov_1.343195_g271848_i0 PRJNA737474 272526 242 1.343195 3.2505319 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 81.3 5.94e-16   NR MBA2670853.1 2026742 g271848 i0 56.3 0.880165289256198 71 31 88 0 224 12 67 137 MBA2670853.1 AAA family ATPase [Gemmatimonadota bacterium] diamond 213 81.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
33108339 33108339 PRJNA737474g_S_NODE_272598_length_259_cov_0.935484_g271304_i0 PRJNA737474 272598 259 0.935484 2.42290356 Longimicrobium sp. 2029185 Bacteria Bacteria 58.5 1.24e-7   NR WP_331876762.1 2029185 g271304 i0 44.4 2.77992277992278 72 33 78.8 2 233 30 419 487 WP_331876762.1 amino acid adenylation domain-containing protein, partial [Longimicrobium sp.] diamond 720 58.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
33112281 33112281 PRJNA737474f_S_NODE_322262_length_228_cov_2.135484_g321584_i0 PRJNA737474 322262 228 2.135484 4.86890352 Bacteria 2 Bacteria Bacteria 58.5 8.48e-8   NR MCI0432059.1 2026742 g321584 i0 45.3 4.11842105263158 64 32 84.2 1 1 192 278 338 MCI0432059.1 serine hydrolase [Gemmatimonadota bacterium] diamond 939 58.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
33112371 33112371 PRJNA737474g_S_NODE_145806_length_298_cov_2.906667_g144512_i0 PRJNA737474 145806 298 2.906667 8.66186766 Bacteria 2 Bacteria Bacteria 111 1.23e-27   NR MDX2059672.1 2448054 g144512 i0 86.7 1.20805369127517 60 8 60.4 0 253 74 197 256 MDX2059672.1 enoyl-ACP reductase FabI [Gemmatimonadales bacterium] diamond 360 112 0.991071428571429 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
33142424 33142424 PRJNA737474g_S_NODE_265215_length_260_cov_2.106952_g263921_i0 PRJNA737474 265215 260 2.106952 5.4780752 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 118 1.31e-29   NR HEY7480050.1 2448054 g263921 i0 76.7 1.68461538461538 73 17 84.2 0 259 41 318 390 HEY7480050.1 zinc-dependent alcohol dehydrogenase [Gemmatimonadales bacterium] diamond 438 118 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
33158671 33158671 PRJNA737474f_S_NODE_39240_length_364_cov_2.044674_g38562_i0 PRJNA737474 39240 364 2.044674 7.44261336 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 57 1.49e-6   NR MBP6444623.1 2448054 g38562 i0 44.1 2.20879120879121 68 35 54.4 2 360 163 144 210 MBP6444623.1 M28 family peptidase [Gemmatimonadales bacterium] diamond 804 57 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
33163753 33163753 PRJNA737474g_S_NODE_91904_length_335_cov_2.312977_g90610_i0 PRJNA737474 91904 335 2.312977 7.74847295 Pseudomonadati 3379134 Bacteria Bacteria 65.9 2.22e-11   NR OPX30730.1 1956166 g90610 i0 60.7 2.00597014925373 56 22 50.1 0 332 165 40 95 OPX30730.1 MAG: co-chaperone GroES [Gemmatimonadaceae bacterium 4484_173] diamond 672 66.2 0.995468277945619 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium 4484_173

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;