RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA737474", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA737474 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32954294 32954294 PRJNA737474f_S_NODE_55890_length_331_cov_4.658915_g55212_i0 PRJNA737474 55890 331 4.658915 15.42100865 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 44.7 0.0209   NR MCX7737216.1 2447898 g55212 i0 54.5 0.299093655589124 33 13 28.1 1 226 134 454 486 MCX7737216.1 amidophosphoribosyltransferase [Candidatus Kapaibacterium sp.] diamond 99 44.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32972249 32972249 PRJNA737474g_S_NODE_39338_length_456_cov_3.229765_g38048_i0 PRJNA737474 39338 456 3.229765 14.7277284 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 164 1.85e-47   NR HEX5316326.1 2447898 g38048 i0 66.7 3.08552631578947 117 39 77 0 2 352 142 258 HEX5316326.1 SDR family oxidoreductase [Candidatus Kapaibacterium sp.] diamond 1407 164 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;