RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA737474", tax_clade = "Caldisericota/Cryosericota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 1 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Caldisericota/Cryosericota group · 1 ✖

bioproject 1

  • PRJNA737474 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33022168 33022168 PRJNA737474f_S_NODE_20684_length_451_cov_2.322751_g20007_i0 PRJNA737474 20684 451 2.322751 10.47560701 Caldisericaceae bacterium 2820293 Bacteria Bacteria 90.1 1.03e-18   NR MCD6376986.1 2820293 g20007 i0 66.7 1.60310421286031 63 21 41.9 0 296 108 193 255 MCD6376986.1 SDR family oxidoreductase [Caldisericaceae bacterium] diamond 723 90.1 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia Caldisericales Caldisericaceae   Caldisericaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;