RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA737474", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA737474 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25577829 25577829 PRJNA737474f_S_NODE_170545_length_259_cov_1.962366_g169867_i0 PRJNA737474 170545 259 1.962366 5.08252794 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 78.2 1.54e-14   NR PYM14973.1 2053607 g169867 i0 57.3 1.76061776061776 75 21 86.9 2 1 225 489 552 PYM14973.1 MAG: anthranilate synthase component I [Candidatus Rokuibacteriota bacterium] diamond 456 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32987259 32987259 PRJNA737474c_S_NODE_3787_length_565_cov_2.022358_g2971_i0 PRJNA737474 3787 565 2.022358 11.4263227 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 60.5 4.49e-7   NR PWU23789.1 2053607 g2971 i0 72.5 0.748672566371681 40 11 21.2 0 563 444 303 342 PWU23789.1 MAG: branched-chain amino acid ABC transporter permease [Candidatus Rokuibacteriota bacterium] diamond 423 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
33004652 33004652 PRJNA737474e_S_NODE_25171_length_265_cov_1.916667_g24289_i0 PRJNA737474 25171 265 1.916667 5.07916755 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 54.3 4.05e-6   NR PYN47016.1 2053607 g24289 i0 40.5 0.894339622641509 79 44 86 1 6 233 422 500 PYN47016.1 MAG: replicative DNA helicase [Candidatus Rokuibacteriota bacterium] diamond 237 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
33056492 33056492 PRJNA737474f_S_NODE_56845_length_330_cov_1.284047_g56167_i0 PRJNA737474 56845 330 1.284047 4.2373551 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 57.4 7.11e-7   NR PYM15895.1 2053607 g56167 i0 39.2 0.718181818181818 79 47 71.8 1 24 260 443 520 PYM15895.1 MAG: SIR2 family protein [Candidatus Rokuibacteriota bacterium] diamond 237 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;