RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA737474", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA737474 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25721351 25721351 PRJNA737474g_S_NODE_244146_length_265_cov_1.458333_g242852_i0 PRJNA737474 244146 265 1.458333 3.86458245 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 91.7 2.23e-20   NR HYA01171.1 2838779 g242852 i0 58 2.50188679245283 81 34 91.7 0 21 263 100 180 HYA01171.1 SAM-dependent methyltransferase [Candidatus Binatia bacterium] diamond 663 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
33039067 33039067 PRJNA737474f_S_NODE_164724_length_261_cov_1.936170_g164046_i0 PRJNA737474 164724 261 1.93617 5.0534037 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 76.6 5.03e-14   NR MET0153553.1 2838779 g164046 i0 46.6 3.82758620689655 73 39 83.9 0 2 220 101 173 MET0153553.1 lipase maturation factor family protein [Candidatus Binatia bacterium] diamond 999 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
33176473 33176473 PRJNA737474g_S_NODE_176912_length_286_cov_0.924883_g175618_i0 PRJNA737474 176912 286 0.924883 2.64516538 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 44.3 0.00957   NR MFQ5351812.1 2838779 g175618 i0 34.1 0.923076923076923 88 48 92.3 2 285 22 46 123 MFQ5351812.1 hypothetical protein [Candidatus Binatia bacterium] diamond 264 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;