RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA734348", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 5 ✖

tax_phylum 1

  • Thermoproteota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4547788 4547788 PRJNA734348_S_NODE_2264_length_238_cov_2.157576_g2255_i0 PRJNA734348 2264 238 2.157576 5.13503088 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.021   NTclustered gi|323706731|gb|CP002529.1| 985053 g2255 i0 100 0.117647058823529 28 0 12 0 139 166 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
16499976 16499976 PRJNA734348_P_NODE_140333_length_232_cov_2.201258_g139635_i0 PRJNA734348 140333 232 2.201258 5.10691856 Sulfolobus sp. E5 2200884 Archaea Archaea 128 4.55e-33   NR TRM73770.1 2200884 g139635 i0 98.5 0.866379310344828 67 1 86.6 0 230 30 160 226 TRM73770.1 acetaldehyde dehydrogenase [Sulfolobus sp. E5] diamond 201 128 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus sp. E5
28252564 28252564 PRJNA734348_P_NODE_99806_length_249_cov_0.875000_g99108_i0 PRJNA734348 99806 249 0.875 2.17875 Pyrobaculum sp. 2004705 Archaea Archaea 152 7e-46   NR MEM1598281.1 2004705 g99108 i0 100 0.939759036144578 78 0 94 0 235 2 1 78 MEM1598281.1 hypothetical protein [Pyrobaculum sp.] diamond 234 152 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum sp.
28600026 28600026 PRJNA734348_P_NODE_103467_length_248_cov_0.880000_g102769_i0 PRJNA734348 103467 248 0.88 2.1824 Pyrobaculum sp. 2004705 Archaea Archaea 102 3.61e-24   NR MEM3996814.1 2004705 g102769 i0 100 0.568548387096774 47 0 56.9 0 107 247 1 47 MEM3996814.1 dihydroorotate dehydrogenase 2 [Pyrobaculum sp.] diamond 141 102 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum sp.
29420670 29420670 PRJNA734348_P_NODE_72889_length_267_cov_1.458763_g72191_i0 PRJNA734348 72889 267 1.458763 3.89489721 Thermoproteota archaeon 2056631 Archaea Archaea 157 7.13e-45   NR MDQ4051006.1 2056631 g72191 i0 89.8 0.98876404494382 88 9 98.9 0 2 265 26 113 MDQ4051006.1 DHHA1 domain-containing protein [Thermoproteota archaeon] diamond 264 157 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;