RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA734348" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29020879 29020879 PRJNA734348_P_NODE_87528_length_254_cov_1.701657_g86830_i0 PRJNA734348 87528 254 1.701657 4.32220878 root 1 Root_unresolved Root_unresolved 100 2.01e-22   NR MBN1860909.1 2806419 g86830 i0 54.8 1.98425196850394 84 38 99.2 0 3 254 141 224 MBN1860909.1 carboxypeptidase regulatory-like domain-containing protein [Thermoplasmatota archaeon] diamond 504 100 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30842407 30842407 PRJNA734348_P_NODE_134414_length_241_cov_0.869048_g133716_i0 PRJNA734348 134414 241 0.869048 2.09440568 Thermoplasmata archaeon 1906666 Archaea Archaea 51.2 5.51e-6   NR MCK4718806.1 1906666 g133716 i0 42 0.622406639004149 50 29 62.2 0 88 237 1 50 MCK4718806.1 hypothetical protein [Thermoplasmata archaeon] diamond 150 51.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;