RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA734348", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13951507 13951507 PRJNA734348_P_NODE_93291_length_251_cov_0.865169_g92593_i0 PRJNA734348 93291 251 0.865169 2.17157419 Orthorubulavirus 2560195 Viruses Viruses 459 1.1499999999999996e-124   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g92593 i0 99.602 67.99203187251 251 1 100 0 1 251 4128 3878 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 17066 459 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
28000235 28000235 PRJNA734348_P_NODE_65225_length_274_cov_2.124378_g64528_i0 PRJNA734348 65225 274 2.124378 5.82079572 brine shrimp yue-like virus 8 2900460 Viruses Viruses 145 4.32e-38   NR UNI74191.1 2900460 g64528 i0 77.4 1.01824817518248 93 18 98.5 1 3 272 1628 1720 UNI74191.1 MAG: RNA-dependent RNA polymerase [brine shrimp yue-like virus 8] diamond 279 145 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;