RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJNA734348" and tax_phylum = "Nanobdellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26799234 26799234 PRJNA734348_P_NODE_89181_length_253_cov_1.355556_g88483_i0 PRJNA734348 89181 253 1.355556 3.42955668 Nanobdellota archaeon 2026764 Archaea Archaea 45.4 0.00441   NR MEK6878400.1 2026764 g88483 i0 41 0.723320158102767 61 33 72.3 2 237 55 172 229 MEK6878400.1 toprim domain-containing protein [Nanoarchaeota archaeon] diamond 183 45.4 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27716209 27716209 PRJNA734348_P_NODE_120444_length_244_cov_0.900585_g119746_i0 PRJNA734348 120444 244 0.900585 2.1974274 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 77.8 7.39e-16   NR MDD5651540.1 2910166 g119746 i0 61.3 0.762295081967213 62 24 76.2 0 233 48 88 149 MDD5651540.1 hypothetical protein [Candidatus Nanoarchaeia archaeon] diamond 186 77.8 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
29073710 29073710 PRJNA734348_P_NODE_41288_length_310_cov_2.772152_g40592_i0 PRJNA734348 41288 310 2.772152 8.5936712 Nanobdellota archaeon 2026764 Archaea Archaea 66.2 1.86e-10   NR MBL7148073.1 2026764 g40592 i0 54.7 1.0258064516129 53 24 51.3 0 5 163 127 179 MBL7148073.1 class I SAM-dependent methyltransferase [Nanoarchaeota archaeon] diamond 318 66.2 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29736362 29736362 PRJNA734348_P_NODE_73710_length_266_cov_1.616580_g73012_i0 PRJNA734348 73710 266 1.61658 4.3001028 Nanobdellota archaeon 2026764 Archaea Archaea 46.2 0.00103   NR MFH1133133.1 2026764 g73012 i0 36 0.845864661654135 75 47 83.5 1 43 264 33 107 MFH1133133.1 dUTP diphosphatase [Nanoarchaeota archaeon] diamond 225 46.2 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32739366 32739366 PRJNA734348_P_NODE_80740_length_260_cov_1.518717_g80042_i0 PRJNA734348 80740 260 1.518717 3.9486642 Nanobdellota archaeon 2026764 Archaea Archaea 102 5.1399999999999994e-24   NR MEK6884559.1 2026764 g80042 i0 54.2 0.957692307692308 83 38 95.8 0 254 6 227 309 MEK6884559.1 NUMOD3 domain-containing DNA-binding protein [Nanoarchaeota archaeon] diamond 249 102 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;