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contig_metadata

17 rows where bioproject = "PRJNA734348" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA734348 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
717834 717834 PRJNA734348_P_NODE_22501_length_416_cov_3.918367_g21806_i0 PRJNA734348 22501 416 3.918367 16.30040672 Vannella septentrionalis 197531 Discosea other_Eukaryota 675 0   NTclustered gi|300078499|gb|GU001161.1| 197531 g21806 i0 95.913 8.41826923076923 416 17 100 0 1 416 1616 1201 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3502 675 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
718060 718060 PRJNA734348_P_NODE_32561_length_341_cov_1.776119_g31865_i0 PRJNA734348 32561 341 1.776119 6.05656579 Vannella septentrionalis 197531 Discosea other_Eukaryota 604 1.9699999999999992e-168   NTclustered gi|300078499|gb|GU001161.1| 197531 g31865 i0 98.547 67.5894428152493 344 2 100 1 1 341 2962 2619 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 23048 604 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
5820704 5820704 PRJNA734348_P_NODE_122745_length_243_cov_1.788235_g122047_i0 PRJNA734348 122745 243 1.788235 4.34541105 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 425 1.12e-114   NTclustered gi|300078498|gb|GU001160.1| 5755 g122047 i0 98.354 16.4855967078189 243 2 100 2 1 243 5659 5419 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4006 425 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5820875 5820875 PRJNA734348_P_NODE_131225_length_241_cov_1.696429_g130527_i0 PRJNA734348 131225 241 1.696429 4.08839389 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 339 1.49e-88   NTclustered gi|330902855|gb|JF298253.1| 1017091 g130527 i0 92.181 54.49377593361 243 14 100 4 1 241 1681 1920 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 13133 339 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
12196842 12196842 PRJNA734348_P_NODE_144250_length_226_cov_2.986928_g143552_i0 PRJNA734348 144250 226 2.986928 6.75045728 Ripella sp. GP2 1217115 Discosea other_Eukaryota 394 2.899999999999999e-105   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g143552 i0 98.23 91.6769911504425 226 2 100 1 1 226 1377 1600 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 20719 394 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
12198346 12198346 PRJNA734348_P_NODE_81350_length_259_cov_2.500000_g80652_i0 PRJNA734348 81350 259 2.5 6.475 uncultured Vannellidae 544561 Discosea other_Eukaryota 462 9.2e-126   NTclustered gi|270381377|emb|FN598227.1| 544561 g80652 i0 98.842 83.953667953668 259 3 100 0 1 259 1012 754 Uncultured Vannellidae partial 18S rRNA gene, clone BIO1_A11 blastn 21744 462 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
13951080 13951080 PRJNA734348_P_NODE_28851_length_362_cov_3.110727_g28156_i0 PRJNA734348 28851 362 3.110727 11.26083174 Ripella 1217112 Discosea other_Eukaryota 527 4.679999999999999e-145   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g28156 i0 93.838 98.853591160221 357 10 99 6 1 357 645 989 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 35785 532 0.990601503759398 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
14747953 14747953 PRJNA734348_P_NODE_84692_length_256_cov_2.978142_g83994_i0 PRJNA734348 84692 256 2.978142 7.62404352 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 353 5.7e-93   NTclustered gi|300078498|gb|GU001160.1| 5755 g83994 i0 91.603 1.0234375 262 13 99 8 1 255 5666 5925 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 262 353 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16020826 16020826 PRJNA734348_P_NODE_42033_length_310_cov_1.763713_g41337_i0 PRJNA734348 42033 310 1.763713 5.4675103 Vannella septentrionalis 197531 Discosea other_Eukaryota 542 1.41e-149   NTclustered gi|300078499|gb|GU001161.1| 197531 g41337 i0 98.077 74.0483870967742 312 4 100 1 1 310 2710 2399 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 22955 542 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
17295528 17295528 PRJNA734348_P_NODE_140934_length_231_cov_2.417722_g140236_i0 PRJNA734348 140934 231 2.417722 5.58493782 Ripella platypodia 2047821 Discosea other_Eukaryota 375 1.08e-99   NTclustered gi|1269228381|gb|MF683506.1| 2047821 g140236 i0 96.121 100.367965367965 232 6 100 3 1 231 267 496 Ripella platypodia clone 26.10.45 18S ribosomal RNA gene, partial sequence blastn 23185 375 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
17296206 17296206 PRJNA734348_P_NODE_36574_length_322_cov_13.092369_g35878_i0 PRJNA734348 36574 322 13.092369 42.15742818 Ripella sp. GP2 1217115 Discosea other_Eukaryota 516 8.92e-142   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g35878 i0 95.652 98.2546583850932 322 12 100 2 1 322 330 11 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 31638 516 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
21120339 21120339 PRJNA734348_P_NODE_22177_length_421_cov_1.321839_g21484_i0 PRJNA734348 22177 421 1.321839 5.56494219 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 750 0   NTclustered gi|330902855|gb|JF298253.1| 1017091 g21484 i0 98.815 46.6698337292162 422 3 100 2 1 421 519 99 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 19648 750 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
22396240 22396240 PRJNA734348_P_NODE_73938_length_266_cov_1.440415_g73240_i0 PRJNA734348 73938 266 1.440415 3.8315039 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 291 4.74e-74   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g73240 i0 88.43 27.5639097744361 242 26 91 2 25 265 1213 1453 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 7332 291 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24945343 24945343 PRJNA734348_P_NODE_78300_length_262_cov_1.613757_g77602_i0 PRJNA734348 78300 262 1.613757 4.22804334 Vannella septentrionalis 197531 Discosea other_Eukaryota 484 1.99e-132   NTclustered gi|300078499|gb|GU001161.1| 197531 g77602 i0 100 31.9274809160305 262 0 100 0 1 262 4329 4068 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 8365 484 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
29452091 29452091 PRJNA734348_P_NODE_37510_length_319_cov_1.654472_g36814_i0 PRJNA734348 37510 319 1.654472 5.27776568 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 102 2.02e-25   NR XP_004348720.1 1257118 g36814 i0 59.3 0.761755485893417 81 33 76.2 0 2 244 48 128 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 243 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29862877 29862877 PRJNA734348_P_NODE_99631_length_249_cov_0.875000_g98933_i0 PRJNA734348 99631 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 66.2 2.11e-10   NR XP_004335867.1 1257118 g98933 i0 48.1 0.975903614457831 81 38 96.4 3 2 241 138 215 XP_004335867.1 guanylyl cyclase [Acanthamoeba castellanii str. Neff] diamond 243 66.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32297476 32297476 PRJNA734348_P_NODE_76239_length_264_cov_1.319372_g75541_i0 PRJNA734348 76239 264 1.319372 3.48314208 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 105 5.0599999999999996e-24   NR XP_004335836.1 1257118 g75541 i0 59.5 0.897727272727273 79 28 85.2 1 262 38 36 114 XP_004335836.1 uncharacterized protein ACA1_076760 [Acanthamoeba castellanii str. Neff] diamond 237 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;