RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA734348" and tax_phylum = "Candidatus Sysuimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sysuimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31917358 31917358 PRJNA734348_P_NODE_131737_length_241_cov_0.916667_g131039_i0 PRJNA734348 131737 241 0.916667 2.20916747 Candidatus Sysuimicrobiota bacterium CSP1-3 1640515 Bacteria Bacteria 99 8.9e-23   NR KRT76721.1 1640515 g131039 i0 63.9 0.896265560165975 72 26 89.6 0 223 8 73 144 KRT76721.1 MAG: hypothetical protein XU14_C0033G0019 [Candidatus Sysuimicrobiota bacterium CSP1-3] diamond 216 99 1 Bacteria   Bacillati Candidatus Sysuimicrobiota         Candidatus Sysuimicrobiota bacterium CSP1-3
32297479 32297479 PRJNA734348_P_NODE_80399_length_260_cov_2.048128_g79701_i0 PRJNA734348 80399 260 2.048128 5.3251328000000004 Bacillati bacterium ANGP1 2569760 Bacteria Bacteria 48.5 4e-4   NR TMI89331.1 2569760 g79701 i0 44.1 0.680769230769231 59 33 68.1 0 14 190 306 364 TMI89331.1 MAG: histidinol-phosphate transaminase [Bacillati bacterium ANGP1] diamond 177 48.5 1 Bacteria   Bacillati Candidatus Sysuimicrobiota Candidatus Sysuimicrobiia Candidatus Sysuimicrobiales Candidatus Segetimicrobiaceae Candidatus Segetimicrobium Candidatus Segetimicrobium genomatis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;