RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA734348" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA734348 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12196363 12196363 PRJNA734348_P_NODE_117150_length_245_cov_0.895349_g116452_i0 PRJNA734348 117150 245 0.895349 2.19360505 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 122 3.33e-30   NR HEY7648768.1 2072417 g116452 i0 67.9 0.991836734693878 81 26 99.2 0 2 244 461 541 HEY7648768.1 MASE1 domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 243 122 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
12677208 12677208 PRJNA734348_P_NODE_96030_length_250_cov_0.870056_g95332_i0 PRJNA734348 96030 250 0.870056 2.17514 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 137 8e-36   NR HEV8471507.1 2072417 g95332 i0 81.5 5.856 81 15 97.2 0 2 244 317 397 HEV8471507.1 IlvD/Edd family dehydratase [Candidatus Methylomirabilota bacterium] diamond 1464 137 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28220831 28220831 PRJNA734348_P_NODE_108446_length_247_cov_0.885057_g107748_i0 PRJNA734348 108446 247 0.885057 2.18609079 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 124 1.6999999999999996e-31   NR HYE32726.1 2072417 g107748 i0 65.8 2.92712550607287 79 27 96 0 240 4 336 414 HYE32726.1 response regulator [Candidatus Methylomirabilota bacterium] diamond 723 124 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30305712 30305712 PRJNA734348_P_NODE_63972_length_275_cov_3.801980_g63275_i0 PRJNA734348 63972 275 3.80198 10.455445 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 43.1 0.0383   NR HUP55403.1 2072417 g63275 i0 43.7 0.774545454545455 71 36 73.1 2 36 236 144 214 HUP55403.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Candidatus Methylomirabilota bacterium] diamond 213 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30431985 30431985 PRJNA734348_P_NODE_147393_length_209_cov_6.669118_g146695_i0 PRJNA734348 147393 209 6.669118 13.93845662 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 42.7 0.0237   NR MBP1775700.1 2072417 g146695 i0 46.3 0.588516746411483 41 22 58.9 0 175 53 11 51 MBP1775700.1 adenosine deaminase [Candidatus Methylomirabilota bacterium] diamond 123 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32297460 32297460 PRJNA734348_P_NODE_49919_length_290_cov_1.400922_g49222_i0 PRJNA734348 49919 290 1.400922 4.0626738 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 159 2.41e-45   NR HXG18864.1 2072417 g49222 i0 75 0.951724137931034 92 23 95.2 0 12 287 128 219 HXG18864.1 glycosyltransferase [Candidatus Methylomirabilota bacterium] diamond 276 159 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;