RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA734348", tax_phylum = "Candidatus Dormiibacterota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

  • Candidatus Dormiibacterota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27220393 27220393 PRJNA734348_P_NODE_51162_length_289_cov_1.125000_g50465_i0 PRJNA734348 51162 289 1.125 3.25125 PVC group 1783257 Bacteria Bacteria 45.1 0.00726   NR HXJ72066.1 2052315 g50465 i0 33.3 1.43252595155709 69 40 65.4 1 21 209 73 141 HXJ72066.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 414 45.1 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
27779127 27779127 PRJNA734348_P_NODE_150664_length_196_cov_5.544715_g149966_i0 PRJNA734348 150664 196 5.544715 10.8676414 Candidatus Aeolococcus gillhamiae 3127015 Bacteria Bacteria 42.7 0.0194   NR WP_337313605.1 3127015 g149966 i0 43.6 0.596938775510204 39 22 59.7 0 167 51 29 67 WP_337313605.1 hypothetical protein [Candidatus Aeolococcus gillhamiae] diamond 117 42.7 1 Bacteria   Bacillati Candidatus Dormiibacterota Candidatus Dormibacteria Candidatus Aeolococcales Candidatus Aeolococcaceae Candidatus Aeolococcus Candidatus Aeolococcus gillhamiae
30062486 30062486 PRJNA734348_P_NODE_112631_length_246_cov_0.890173_g111933_i0 PRJNA734348 112631 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 122 2.6199999999999997e-30   NR HUY85172.1 2052315 g111933 i0 72.2 3.80487804878049 79 21 95.1 1 244 11 209 287 HUY85172.1 AAA family ATPase [Candidatus Dormiibacterota bacterium] diamond 936 122 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
30178744 30178744 PRJNA734348_P_NODE_32112_length_343_cov_3.003704_g31416_i0 PRJNA734348 32112 343 3.003704 10.30270472 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 179 1.9e-53   NR MDA8330367.1 2052315 g31416 i0 71.9 1.99416909620991 114 32 99.7 0 1 342 67 180 MDA8330367.1 DNA adenine methylase [Candidatus Dormiibacterota bacterium] diamond 684 179 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;