RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA734348" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 8 ✖

bioproject 1

  • PRJNA734348 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1993781 1993781 PRJNA734348_P_NODE_20662_length_441_cov_0.961957_g19971_i0 PRJNA734348 20662 441 0.961957 4.24223037 Tick-associated circular virus-2 2951484 Viruses Viruses 787 0   NTclustered gi|2263979286|gb|ON456885.1| 2951484 g19971 i0 99.537 0.979591836734694 432 2 98 0 1 432 1994 1563 Tick-associated circular virus-2 isolate Tick114CressC5, complete genome blastn 432 787 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae   Tick-associated circular virus-2
1994744 1994744 PRJNA734348_P_NODE_67442_length_272_cov_1.804020_g66745_i0 PRJNA734348 67442 272 1.80402 4.9069344 Sichuan tick-associated circovirus 3 2951470 Viruses Viruses 87.9 6.84e-13   NTclustered gi|2263979276|gb|ON456881.1| 2951470 g66745 i0 93.443 0.555147058823529 61 1 22 3 22 81 2935 2877 Sichuan tick-associated circovirus 3 isolate Tick101/112Circo, complete genome blastn 151 87.9 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Sichuan tick-associated circovirus 3
10922451 10922451 PRJNA734348_P_NODE_57129_length_282_cov_2.693780_g56432_i0 PRJNA734348 57129 282 2.69378 7.5964596 Human papillomavirus 10566 Viruses Viruses 516 7.67e-142   NTclustered gi|371486244|gb|JF966378.1| 10566 g56432 i0 99.645 1.28368794326241 282 1 100 0 1 282 6782 7063 Human papillomavirus isolate 915 F 06 008 CG2, complete genome blastn 362 516 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
10922917 10922917 PRJNA734348_P_NODE_83069_length_258_cov_1.421622_g82371_i0 PRJNA734348 83069 258 1.421622 3.66778476 Gammapapillomavirus 11 1513256 Viruses Viruses 472 1.52e-128   NTclustered gi|870702434|gb|KP692116.1| 1682341 g82371 i0 99.612 2 258 1 100 0 1 258 4516 4773 Human papillomavirus type 202 isolate HPV202, complete genome blastn 516 472 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 11
22395124 22395124 PRJNA734348_P_NODE_15298_length_544_cov_2.445860_g14615_i0 PRJNA734348 15298 544 2.44586 13.3054784 Sichuan mosquito circovirus 3 2863961 Viruses Viruses 1005 0   NTclustered gi|2717470348|gb|PP272780.1| 2863961 g14615 i0 100 3.91176470588235 544 0 100 0 1 544 500 1043 MAG: Sichuan mosquito circovirus 3 isolate circo_1 replication-associated protein gene, partial cds blastn 2128 1005 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Sichuan mosquito circovirus 3
24943810 24943810 PRJNA734348_P_NODE_135000_length_240_cov_2.335329_g134302_i0 PRJNA734348 135000 240 2.335329 5.6047896 Human papillomavirus 10566 Viruses Viruses 427 3.07e-115   NTclustered gi|1559669707|gb|MH777252.2| 10566 g134302 i0 98.75 3.67083333333333 240 3 100 0 1 240 854 1093 MAG: Human papillomavirus isolate HPV-mSK_110, complete genome blastn 881 427 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
27368862 27368862 PRJNA734348_P_NODE_68783_length_271_cov_1.378788_g68086_i0 PRJNA734348 68783 271 1.378788 3.73651548 Cressdnaviricota sp. 2748378 Viruses Viruses 114 2.58e-28   NR UOF79962.1 2748378 g68086 i0 75.7 0.774907749077491 70 17 77.5 0 260 51 243 312 UOF79962.1 rep protein [Cressdnaviricota sp.] diamond 210 114 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
31980563 31980563 PRJNA734348_P_NODE_65338_length_274_cov_1.900498_g64641_i0 PRJNA734348 65338 274 1.900498 5.20736452 Forsythia suspensa parvo-like virus 2739858 Viruses Viruses 54.3 4.45e-6   NR QKK82944.1 2739858 g64641 i0 37 2.92335766423358 92 53 95.3 2 265 5 120 211 QKK82944.1 hypothetical protein 3 [Forsythia suspensa parvo-like virus] diamond 801 54.3 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Forsythia suspensa parvo-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;