RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA734348", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA734348 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26609067 26609067 PRJNA734348_S_NODE_1001_length_315_cov_7.834711_g992_i0 PRJNA734348 1001 315 7.834711 24.67933965 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 47 4.49e-4   NR KAJ8043773.1 206669 g992 i0 51.1 0.923809523809524 47 23 44.8 0 12 152 53 99 KAJ8043773.1 hypothetical protein HOLleu_11030 [Holothuria leucospilota] diamond 291 47 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29989269 29989269 PRJNA734348_P_NODE_131671_length_241_cov_1.160714_g130973_i0 PRJNA734348 131671 241 1.160714 2.79732074 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 54.7 7.7300000000000005e-07   NR KAJ8031120.1 206669 g130973 i0 32.5 1.9045643153527 77 51 94.6 1 228 1 69 145 KAJ8031120.1 hypothetical protein HOLleu_27741 [Holothuria leucospilota] diamond 459 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30747561 30747561 PRJNA734348_P_NODE_117554_length_245_cov_0.895349_g116856_i0 PRJNA734348 117554 245 0.895349 2.19360505 Patiria miniata 46514 Echinodermata other_Eukaryota 90.9 4.43e-19   NR XP_038062329.1 46514 g116856 i0 56.8 9.83265306122449 81 35 99.2 0 2 244 847 927 XP_038062329.1 uncharacterized protein LOC119732798 [Patiria miniata] diamond 2409 90.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
32043947 32043947 PRJNA734348_P_NODE_56258_length_283_cov_2.342857_g55561_i0 PRJNA734348 56258 283 2.342857 6.63028531 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 47 3.21e-4   NR KAJ8043773.1 206669 g55561 i0 51.1 1.57950530035336 47 23 49.8 0 242 102 53 99 KAJ8043773.1 hypothetical protein HOLleu_11030 [Holothuria leucospilota] diamond 447 47 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;