RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA734348", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA734348 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18568611 18568611 PRJNA734348_P_NODE_105995_length_247_cov_3.149425_g105297_i0 PRJNA734348 105995 247 3.149425 7.77907975 Orbicella faveolata 48498 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|1176088544|ref|XM_020758960.1| 48498 g105297 i0 100 0.11336032388664 28 0 11 0 23 50 119 92 PREDICTED: Orbicella faveolata mitochondrial carrier homolog 2-like (LOC110052789), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
26640909 26640909 PRJNA734348_P_NODE_79461_length_261_cov_1.585106_g78763_i0 PRJNA734348 79461 261 1.585106 4.13712666 Stylophora pistillata 50429 Cnidaria other_Eukaryota 91.7 2.92e-19   NR PFX23400.1 50429 g78763 i0 83.6 0.632183908045977 55 9 63.2 0 261 97 493 547 PFX23400.1 Carbonic anhydrase 2 [Stylophora pistillata] diamond 165 91.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
29936368 29936368 PRJNA734348_P_NODE_66651_length_273_cov_1.430000_g65954_i0 PRJNA734348 66651 273 1.43 3.9039 Opisthokonta 33154 Cnidaria other_Eukaryota 134 6.4e-38   NR XP_029193069.2 45264 g65954 i0 74.2 13.7472527472527 89 23 97.8 0 269 3 20 108 XP_029193069.2 40S ribosomal protein S15a isoform X1 [Acropora millepora] diamond 3753 135 0.992592592592593 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
30157173 30157173 PRJNA734348_P_NODE_108172_length_247_cov_0.885057_g107474_i0 PRJNA734348 108172 247 0.885057 2.18609079 Metazoa 33208 Cnidaria other_Eukaryota 77.4 2.37e-14   NR XP_065671960.1 6087 g107474 i0 72.7 2.67206477732794 44 12 53.4 0 89 220 180 223 XP_065671960.1 zinc finger MYM-type protein 1-like [Hydra vulgaris] diamond 660 77.8 0.994858611825193 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;