RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA734348", tax_kingdom = "Metazoa" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA734348 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1993871 1993871 PRJNA734348_P_NODE_24582_length_395_cov_3.819876_g23887_i0 PRJNA734348 24582 395 3.819876 15.0885102 Plumatella sp. ZHY-2005 365321 Bryozoa other_Eukaryota 433 1.1599999999999999e-116   NTclustered gi|90992874|gb|DQ333339.1| 365321 g23887 i0 86.683 46.3037974683544 398 43 99 10 1 393 406 14 Plumatella sp. ZHY-2005 28S ribosomal RNA gene, partial sequence blastn 18290 433 1 Eukaryota Opisthokonta Metazoa Bryozoa Phylactolaemata   Plumatellidae Plumatella Plumatella sp. ZHY-2005
8370732 8370732 PRJNA734348_P_NODE_140907_length_231_cov_2.468354_g140209_i0 PRJNA734348 140907 231 2.468354 5.70189774 Paludicella articulata 569425 Bryozoa other_Eukaryota 60.2 1.23e-4   NTclustered gi|2587622415|gb|OR625502.1| 569425 g140209 i0 85.965 7.84848484848485 57 7 24 1 68 123 4035 3979 Paludicella articulata strain VIBE2 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1813 60.2 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Ctenostomatida Paludicellidae Paludicella Paludicella articulata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;