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contig_metadata

13 rows where bioproject = "PRJNA734348", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 13 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 13 ✖

bioproject 1

  • PRJNA734348 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26704027 26704027 PRJNA734348_P_NODE_54821_length_285_cov_1.344340_g54124_i0 PRJNA734348 54821 285 1.34434 3.831369 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 81.6 1.3e-15   NR MCG2712407.1 2035772 g54124 i0 60.3 1.85263157894737 63 23 66.3 1 283 95 928 988 MCG2712407.1 MFS transporter [Candidatus Omnitrophota bacterium] diamond 528 81.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26830963 26830963 PRJNA734348_P_NODE_107721_length_247_cov_0.885057_g107023_i0 PRJNA734348 107721 247 0.885057 2.18609079 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 115 7.38e-28   NR MBI3323880.1 2035772 g107023 i0 63.4 1.9919028340081 82 30 99.6 0 247 2 58 139 MBI3323880.1 outer membrane protein assembly factor BamA [Candidatus Omnitrophota bacterium] diamond 492 115 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27747593 27747593 PRJNA734348_P_NODE_111524_length_246_cov_0.890173_g110826_i0 PRJNA734348 111524 246 0.890173 2.18982558 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 68.9 2.31e-11   NR MCL5098227.1 2035772 g110826 i0 35.8 2.82926829268293 81 40 84.1 1 33 239 1166 1246 MCL5098227.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 696 68.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27936974 27936974 PRJNA734348_P_NODE_68365_length_271_cov_2.050505_g67668_i0 PRJNA734348 68365 271 2.050505 5.55686855 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 177 2.14e-51   NR MBP6343885.1 2035772 g67668 i0 97.8 0.996309963099631 90 2 99.6 0 2 271 79 168 MBP6343885.1 glycosyltransferase [Candidatus Omnitrophota bacterium] diamond 270 177 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27936988 27936988 PRJNA734348_P_NODE_98485_length_249_cov_2.625000_g97787_i0 PRJNA734348 98485 249 2.625 6.53625 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 90.1 3.54e-20   NR MBI4597621.1 2035772 g97787 i0 61.1 0.867469879518072 72 27 85.5 1 249 37 129 200 MBI4597621.1 TetR/AcrR family transcriptional regulator [Candidatus Omnitrophota bacterium] diamond 216 90.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28378830 28378830 PRJNA734348_P_NODE_102406_length_248_cov_2.297143_g101708_i0 PRJNA734348 102406 248 2.297143 5.69691464 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 57.8 1.41e-8   NR MBP9866237.1 2035772 g101708 i0 55 0.725806451612903 60 22 66.5 1 166 2 1 60 MBP9866237.1 thiamine-phosphate kinase [Candidatus Omnitrophota bacterium] diamond 180 57.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29136962 29136962 PRJNA734348_P_NODE_70149_length_269_cov_3.142857_g69451_i0 PRJNA734348 70149 269 3.142857 8.45428533 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 67.8 7.51e-11   NR MCB9771858.1 2035772 g69451 i0 45.1 1.01486988847584 91 25 73.6 2 199 2 64 154 MCB9771858.1 o-succinylbenzoate--CoA ligase [Candidatus Omnitrophota bacterium] diamond 273 67.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30400422 30400422 PRJNA734348_P_NODE_102573_length_248_cov_1.845714_g101875_i0 PRJNA734348 102573 248 1.845714 4.57737072 Candidatus Omnitrophica bacterium CG 2035772 Bacteria Bacteria 137 1.64e-38   NR PIU40545.1 1974742 g101875 i0 82.9 0.991935483870968 82 14 99.2 0 247 2 81 162 PIU40545.1 MAG: hypothetical protein COT00_01110, partial [Candidatus Omnitrophica bacterium CG07_land_8_20_14_0_80_50_8] diamond 246 137 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG07_land_8_20_14_0_80_50_8
30905627 30905627 PRJNA734348_P_NODE_103494_length_248_cov_0.880000_g102796_i0 PRJNA734348 103494 248 0.88 2.1824 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 58.9 1.95e-9   NR MDD3984250.1 2035772 g102796 i0 53.6 0.67741935483871 56 24 65.3 1 28 189 9 64 MDD3984250.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 168 58.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30937287 30937287 PRJNA734348_P_NODE_89554_length_252_cov_2.994413_g88856_i0 PRJNA734348 89554 252 2.994413 7.54592076 Candidatus Omnitrophica bacterium CG1_ 2035772 Bacteria Bacteria 137 1.32e-35   NR OIO38746.1 1805290 g88856 i0 77.4 1 84 19 100 0 252 1 267 350 OIO38746.1 MAG: hypothetical protein AUJ71_02335 [Candidatus Omnitrophica bacterium CG1_02_49_16] diamond 252 137 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG1_02_49_16
30968891 30968891 PRJNA734348_P_NODE_72454_length_267_cov_2.190722_g71756_i0 PRJNA734348 72454 267 2.190722 5.84922774 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 111 3.57e-26   NR MSR77224.1 2035772 g71756 i0 54.5 0.98876404494382 88 40 98.9 0 3 266 367 454 MSR77224.1 HD domain-containing protein [Candidatus Omnitrophota bacterium] diamond 264 111 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32833593 32833593 PRJNA734348_P_NODE_121580_length_244_cov_0.900585_g120882_i0 PRJNA734348 121580 244 0.900585 2.1974274 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 66.2 1.6e-10   NR MBN1869520.1 2035772 g120882 i0 43 1.9672131147541 79 44 95.9 1 2 235 224 302 MBN1869520.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 480 66.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32865063 32865063 PRJNA734348_P_NODE_118480_length_244_cov_1.801170_g117782_i0 PRJNA734348 118480 244 1.80117 4.3948548 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 61.6 6.34e-9   NR MBI1978321.1 2035772 g117782 i0 51.8 0.688524590163934 56 27 68.9 0 231 64 239 294 MBI1978321.1 DUF4340 domain-containing protein [Candidatus Omnitrophota bacterium] diamond 168 61.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;