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contig_metadata

19 rows where bioproject = "PRJNA734348", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 19 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 19 ✖

bioproject 1

  • PRJNA734348 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1992849 1992849 PRJNA734348_P_NODE_106462_length_247_cov_1.770115_g105764_i0 PRJNA734348 106462 247 1.770115 4.37218405 Caenorhabditis elegans 6239 Nematoda Nematoda 457 4.05e-124   NTclustered gi|687865956|emb|LK928046.1| 6239 g105764 i0 100 83.5303643724696 247 0 100 0 1 247 46405 46159 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000432 blastn 20632 457 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
6301278 6301278 PRJNA734348_P_NODE_37525_length_319_cov_1.516260_g36829_i0 PRJNA734348 37525 319 1.51626 4.8368694 Diplogasteridae 50861 Nematoda Nematoda 283 9.74e-72   NTclustered gi|675118776|gb|KJ877247.1| 1538690 g36829 i0 84.828 50.4294670846395 290 34 89 9 1 285 3164 3448 Butlerius sp. VS-2014 28S ribosomal RNA gene, partial sequence blastn 16087 283 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Butlerius Butlerius sp. VS-2014
9645392 9645392 PRJNA734348_P_NODE_110668_length_246_cov_1.722543_g109970_i0 PRJNA734348 110668 246 1.722543 4.23745578 Diploscapter sp. JU359 479134 Nematoda Nematoda 453 5.2100000000000006e-123   NTclustered gi|158821895|gb|EU195959.1| 479134 g109970 i0 100 89.0731707317073 245 0 99 0 2 246 1184 940 Diploscapter sp. JU359 28S ribosomal RNA gene, partial sequence blastn 21912 453 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter sp. JU359
18570732 18570732 PRJNA734348_P_NODE_80355_length_260_cov_2.101604_g79657_i0 PRJNA734348 80355 260 2.101604 5.4641704 Caenorhabditis elegans 6239 Nematoda Nematoda 481 2.55e-131   NTclustered gi|412977031|emb|AL110479.3| 6239 g79657 i0 100 2 260 0 100 0 1 260 282058 281799 Caenorhabditis elegans YAC Y105C5B, complete sequence blastn 520 481 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27052518 27052518 PRJNA734348_P_NODE_111242_length_246_cov_1.063584_g110544_i0 PRJNA734348 111242 246 1.063584 2.61641664 Diploscapter pachys 2018661 Nematoda Nematoda 62.4 4.66e-9   NR PAV75994.1 2018661 g110544 i0 96.6 0.707317073170732 29 1 35.4 0 158 244 1681 1709 PAV75994.1 hypothetical protein WR25_26632 [Diploscapter pachys] diamond 174 62.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
28000209 28000209 PRJNA734348_P_NODE_127325_length_242_cov_1.384615_g126627_i0 PRJNA734348 127325 242 1.384615 3.3507683 Diploscapter pachys 2018661 Nematoda Nematoda 49.3 1.82e-4   NR PAV84384.1 2018661 g126627 i0 88.5 0.322314049586777 26 3 32.2 0 230 153 974 999 PAV84384.1 hypothetical protein WR25_16440 [Diploscapter pachys] diamond 78 49.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
28347275 28347275 PRJNA734348_P_NODE_125086_length_243_cov_0.905882_g124388_i0 PRJNA734348 125086 243 0.905882 2.20129326 Diploscapter pachys 2018661 Nematoda Nematoda 94 5.8100000000000006e-21   NR PAV61371.1 2018661 g124388 i0 80.3 1.50617283950617 61 12 75.3 0 199 17 1 61 PAV61371.1 hypothetical protein WR25_26378 isoform B [Diploscapter pachys] diamond 366 94 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
28820591 28820591 PRJNA734348_P_NODE_119848_length_244_cov_0.900585_g119150_i0 PRJNA734348 119848 244 0.900585 2.1974274 Diploscapter pachys 2018661 Nematoda Nematoda 68.9 1.68e-11   NR PAV80989.1 2018661 g119150 i0 94.4 0.885245901639344 36 2 44.3 0 4 111 95 130 PAV80989.1 hypothetical protein WR25_04784 [Diploscapter pachys] diamond 216 68.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
28947525 28947525 PRJNA734348_P_NODE_92988_length_251_cov_0.865169_g92290_i0 PRJNA734348 92988 251 0.865169 2.17157419 Caenorhabditis angaria 860376 Nematoda Nematoda 94 3.89e-20   NR CAI5446223.1 860376 g92290 i0 63 2.60557768924303 73 27 87.3 0 219 1 376 448 CAI5446223.1 unnamed protein product [Caenorhabditis angaria] diamond 654 94 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
29073719 29073719 PRJNA734348_P_NODE_67348_length_272_cov_2.030151_g66651_i0 PRJNA734348 67348 272 2.030151 5.52201072 Diploscapter pachys 2018661 Nematoda Nematoda 90.1 6.37e-20   NR PAV62172.1 2018661 g66651 i0 100 0.529411764705882 48 0 52.9 0 26 169 85 132 PAV62172.1 hypothetical protein WR25_16976 [Diploscapter pachys] diamond 144 90.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
29199981 29199981 PRJNA734348_P_NODE_128109_length_242_cov_0.911243_g127411_i0 PRJNA734348 128109 242 0.911243 2.20520806 Diploscapter pachys 2018661 Nematoda Nematoda 108 5.1100000000000005e-26   NR PAV65693.1 2018661 g127411 i0 98.1 0.669421487603306 54 1 66.9 0 163 2 297 350 PAV65693.1 hypothetical protein WR25_17212 [Diploscapter pachys] diamond 162 108 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
29231540 29231540 PRJNA734348_P_NODE_129809_length_242_cov_0.911243_g129111_i0 PRJNA734348 129809 242 0.911243 2.20520806 Diploscapter pachys 2018661 Nematoda Nematoda 46.2 0.00212   NR PAV61142.1 2018661 g129111 i0 84 0.309917355371901 25 4 31 0 12 86 357 381 PAV61142.1 hypothetical protein WR25_13341 [Diploscapter pachys] diamond 75 46.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
30400487 30400487 PRJNA734348_P_NODE_90413_length_252_cov_1.435754_g89715_i0 PRJNA734348 90413 252 1.435754 3.61810008 Diploscapter pachys 2018661 Nematoda Nematoda 62.8 3.63e-9   NR PAV89503.1 2018661 g89715 i0 72.7 0.523809523809524 44 12 52.4 0 23 154 8 51 PAV89503.1 hypothetical protein WR25_06164 [Diploscapter pachys] diamond 132 62.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
31126344 31126344 PRJNA734348_P_NODE_98455_length_249_cov_2.738636_g97757_i0 PRJNA734348 98455 249 2.738636 6.81920364 Haemonchus contortus 6289 Nematoda Nematoda 47.8 6.98e-4   NR CDJ87103.1 6289 g97757 i0 65.5 2.09638554216867 29 10 34.9 0 87 1 436 464 CDJ87103.1 Haem peroxidase domain containing protein, partial [Haemonchus contortus] diamond 522 47.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
31579758 31579758 PRJNA734348_P_NODE_127656_length_242_cov_0.911243_g126958_i0 PRJNA734348 127656 242 0.911243 2.20520806 Rhabditida 6236 Nematoda Nematoda 120 9.16e-30   NR NP_001367002.1 6239 g126958 i0 66.2 9.71900826446281 77 24 95.5 1 3 233 338 412 NP_001367002.1 Serine/threonine-protein phosphatase 5 [Caenorhabditis elegans] diamond 2352 121 0.991735537190083 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
31737614 31737614 PRJNA734348_P_NODE_89217_length_253_cov_1.311111_g88519_i0 PRJNA734348 89217 253 1.311111 3.31711083 root 1 Root_unresolved Root_unresolved 97.8 1.52e-21   NR KAK6031666.1 6317 g88519 i0 57.8 4.6600790513834 83 32 97.2 2 252 7 214 294 KAK6031666.1 prepilin-type cleavage/methylation protein [Ostertagia ostertagi] diamond 1179 98.2 0.995926680244399 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Ostertagia Ostertagia ostertagi
31790661 31790661 PRJNA734348_P_NODE_92957_length_251_cov_0.865169_g92259_i0 PRJNA734348 92957 251 0.865169 2.17157419 Diploscapter pachys 2018661 Nematoda Nematoda 42.7 0.04   NR PAV82159.1 2018661 g92259 i0 56.3 0.382470119521912 32 14 38.2 0 98 193 328 359 PAV82159.1 hypothetical protein WR25_19251 [Diploscapter pachys] diamond 96 42.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
32012280 32012280 PRJNA734348_P_NODE_104838_length_248_cov_0.880000_g104140_i0 PRJNA734348 104838 248 0.88 2.1824 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 61.6 8.6e-9   NR CAD5222373.1 6326 g104140 i0 67.6 0.44758064516129 37 12 44.8 0 142 32 5 41 CAD5222373.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 111 61.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
32644388 32644388 PRJNA734348_P_NODE_109500_length_247_cov_0.885057_g108802_i0 PRJNA734348 109500 247 0.885057 2.18609079 Diploscapter pachys 2018661 Nematoda Nematoda 50.8 4.89e-5   NR PAV81939.1 2018661 g108802 i0 82.1 0.340080971659919 28 5 34 0 3 86 281 308 PAV81939.1 hypothetical protein WR25_26866 [Diploscapter pachys] diamond 84 50.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;