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contig_metadata

15 rows where bioproject = "PRJNA734348", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 15 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 15 ✖

bioproject 1

  • PRJNA734348 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1993025 1993025 PRJNA734348_P_NODE_115862_length_245_cov_0.895349_g115164_i0 PRJNA734348 115862 245 0.895349 2.19360505 Desmaulus extinctorium 211681 Mollusca Mollusca 52.8 0.022   NTclustered gi|2519763012|ref|NC_079658.1| 211681 g115164 i0 100 0.114285714285714 28 0 11 0 35 62 1533 1560 Desmaulus extinctorium mitochondrion, complete genome blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Calyptraeidae Desmaulus Desmaulus extinctorium
1994617 1994617 PRJNA734348_P_NODE_60922_length_278_cov_5.629268_g60225_i0 PRJNA734348 60922 278 5.629268 15.64936504 Aplysia californica 6500 Mollusca Mollusca 333 8.159999999999999e-87   NTclustered gi|1897939407|ref|XR_004859148.1| 6500 g60225 i0 89.007 105.964028776978 282 14 100 12 1 278 3736 3468 PREDICTED: Aplysia californica large subunit ribosomal RNA (LOC118478578), rRNA blastn 29458 333 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
6301641 6301641 PRJNA734348_P_NODE_95405_length_250_cov_1.559322_g94707_i0 PRJNA734348 95405 250 1.559322 3.898305 Lymnaeidae 6521 Mollusca Mollusca 457 4.1099999999999985e-124   NTclustered gi|2581856089|gb|OR600223.1| 161081 g94707 i0 99.6 99.9 250 1 100 0 1 250 696 447 Ampullaceana lagotis isolate UO5 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24975 457 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Ampullaceana Ampullaceana lagotis
19048821 19048821 PRJNA734348_P_NODE_18555_length_475_cov_1.330846_g17865_i0 PRJNA734348 18555 475 1.330846 6.3215185 Opisthokonta 33154 Mollusca Mollusca 213 2.7699999999999998e-67   NR KAH9496419.1 55810 g17865 i0 72.9 27.7705263157895 144 39 90.9 0 474 43 52 195 KAH9496419.1 40S ribosomal protein S16 [Bulinus truncatus] diamond 13191 214 0.995327102803738 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Bulinus Bulinus truncatus
21121557 21121557 PRJNA734348_P_NODE_83537_length_257_cov_2.869565_g82839_i0 PRJNA734348 83537 257 2.869565 7.37478205 Mytilus californianus 6549 Mollusca Mollusca 52.8 0.023   NTclustered gi|2334757812|ref|XM_052208460.1| 6549 g82839 i0 100 0.326848249027237 28 0 11 0 1 28 2038 2065 PREDICTED: Mytilus californianus potassium voltage-gated channel protein Shaker-like (LOC127704423), transcript variant X3, mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
23671237 23671237 PRJNA734348_P_NODE_40219_length_310_cov_3.464135_g39523_i0 PRJNA734348 40219 310 3.464135 10.7388185 Patella vulgata 6465 Mollusca Mollusca 63.9 1.34e-5   NTclustered gi|2506338476|ref|XM_050557452.2| 6465 g39523 i0 85.484 0.470967741935484 62 8 20 1 241 302 3402 3462 PREDICTED: Patella vulgata protein MON2 homolog (LOC126827883), mRNA blastn 146 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
27125447 27125447 PRJNA734348_P_NODE_59362_length_280_cov_1.826087_g58665_i0 PRJNA734348 59362 280 1.826087 5.1130436 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 85.9 4.02e-17   NR XP_021379695.1 6573 g58665 i0 48.9 18.8892857142857 94 41 97.5 3 3 275 2247 2336 XP_021379695.1 ubiquitin carboxyl-terminal hydrolase 34-like isoform X1 [Mizuhopecten yessoensis] diamond 5289 86.3 0.995365005793743 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
27242024 27242024 PRJNA734348_P_NODE_85923_length_255_cov_2.747253_g85225_i0 PRJNA734348 85923 255 2.747253 7.00549515 Argopecten irradians 31199 Mollusca Mollusca 45.4 0.00473   NR XP_069110020.1 31199 g85225 i0 60.7 10.2 28 9 32.9 1 242 159 556 581 XP_069110020.1 uncharacterized protein [Argopecten irradians] diamond 2601 45.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
28094761 28094761 PRJNA734348_S_NODE_325_length_456_cov_4.091384_g316_i0 PRJNA734348 325 456 4.091384 18.65671104 Mytilus edulis 6550 Mollusca Mollusca 55.5 9.37e-6   NR CAG2187267.1 6550 g316 i0 41.3 2.08552631578947 63 36 40.8 1 60 245 192 254 CAG2187267.1 unnamed protein product [Mytilus edulis] diamond 951 55.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
29399392 29399392 PRJNA734348_P_NODE_109049_length_247_cov_0.885057_g108351_i0 PRJNA734348 109049 247 0.885057 2.18609079 Metazoa 33208 Mollusca Mollusca 57.8 1.93e-7   NR XP_022301073.1 6565 g108351 i0 40.3 5.24696356275304 72 43 87.4 0 216 1 231 302 XP_022301073.1 uncharacterized protein LOC111109279 [Crassostrea virginica] diamond 1296 57.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
30684222 30684222 PRJNA734348_P_NODE_55653_length_284_cov_1.459716_g54956_i0 PRJNA734348 55653 284 1.459716 4.14559344 Mytilus edulis 6550 Mollusca Mollusca 90.5 9.17e-19   NR CAG2200053.1 6550 g54956 i0 84.9 1.11971830985915 53 8 56 0 126 284 387 439 CAG2200053.1 TMEM129 [Mytilus edulis] diamond 318 90.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
31094998 31094998 PRJNA734348_P_NODE_123395_length_243_cov_0.905882_g122697_i0 PRJNA734348 123395 243 0.905882 2.20129326 Batillaria attramentaria 370345 Mollusca Mollusca 87.4 6.8e-18   NR KAK7501083.1 370345 g122697 i0 57 2.07407407407407 79 34 97.5 0 2 238 138 216 KAK7501083.1 hypothetical protein BaRGS_00007568 [Batillaria attramentaria] diamond 504 87.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Batillariidae Batillaria Batillaria attramentaria
31284623 31284623 PRJNA734348_P_NODE_117635_length_245_cov_0.895349_g116937_i0 PRJNA734348 117635 245 0.895349 2.19360505 Dreissena polymorpha 45954 Mollusca Mollusca 75.1 8.49e-16   NR KAH3829317.1 45954 g116937 i0 70.9 1.33469387755102 55 16 67.3 0 34 198 1 55 KAH3829317.1 hypothetical protein DPMN_131313 [Dreissena polymorpha] diamond 327 75.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
32297441 32297441 PRJNA734348_P_NODE_139039_length_233_cov_5.862500_g138341_i0 PRJNA734348 139039 233 5.8625 13.659625 Mytilus edulis 6550 Mollusca Mollusca 50.1 7.82e-5   NR CAG2187267.1 6550 g138341 i0 45.3 2.02145922746781 53 28 67 1 74 229 192 244 CAG2187267.1 unnamed protein product [Mytilus edulis] diamond 471 50.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
32497259 32497259 PRJNA734348_P_NODE_127499_length_242_cov_1.088757_g126801_i0 PRJNA734348 127499 242 1.088757 2.63479194 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 124 4.459999999999999e-34   NR XP_045177423.1 6596 g126801 i0 74.1 19.0537190082645 81 20 99.2 1 2 241 4 84 XP_045177423.1 40S ribosomal protein S10-like isoform X2 [Mercenaria mercenaria] diamond 4611 125 0.992 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;