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contig_metadata

7 rows where bioproject = "PRJNA734348", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Peregrinibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 7 ✖

tax_clade 1

  • Bacteria candidate phyla · 7 ✖

bioproject 1

  • PRJNA734348 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5822854 5822854 PRJNA734348_P_NODE_98065_length_250_cov_0.870056_g97367_i0 PRJNA734348 98065 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 145 2.32e-38   NR OGJ55954.1 1801914 g97367 i0 87.3 1.896 79 10 94.8 0 10 246 75 153 OGJ55954.1 MAG: hypothetical protein A2706_05620 [Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_51_35] diamond 474 146 0.993150684931507 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_51_35
10922088 10922088 PRJNA734348_P_NODE_37809_length_318_cov_1.257143_g37113_i0 PRJNA734348 37809 318 1.257143 3.99771474 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 394 4.3e-105   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g37113 i0 89.062 96.2358490566038 320 32 100 3 1 318 814573 814255 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 30603 394 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
29294561 29294561 PRJNA734348_P_NODE_94389_length_251_cov_0.865169_g93691_i0 PRJNA734348 94389 251 0.865169 2.17157419 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 162 3.5199999999999995e-46   NR MDB4979133.1 2053688 g93691 i0 98.8 6.94422310756972 83 1 99.2 0 2 250 189 271 MDB4979133.1 transcription elongation factor NusA [Candidatus Peribacteria bacterium] diamond 1743 162 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
29873121 29873121 PRJNA734348_P_NODE_101611_length_249_cov_0.875000_g100913_i0 PRJNA734348 101611 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 117 4.179999999999999e-31   NR OGJ56266.1 1801914 g100913 i0 70.9 2.79518072289157 79 23 95.2 0 12 248 78 156 OGJ56266.1 MAG: hypothetical protein A2706_03475 [Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_51_35] diamond 696 117 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_51_35
30368809 30368809 PRJNA734348_P_NODE_106312_length_247_cov_2.252874_g105614_i0 PRJNA734348 106312 247 2.252874 5.56459878 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 71.6 2.58e-12   NR MDO8649134.1 2030811 g105614 i0 56.7 0.728744939271255 60 25 72.9 1 181 2 1 59 MDO8649134.1 FAD-dependent oxidoreductase [Candidatus Peregrinibacteria bacterium] diamond 180 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
30463586 30463586 PRJNA734348_P_NODE_114093_length_245_cov_2.645349_g113395_i0 PRJNA734348 114093 245 2.645349 6.48110505 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 78.6 7.39e-15   NR HRH93462.1 2053688 g113395 i0 76.6 1.15102040816327 47 11 57.6 0 145 5 4 50 HRH93462.1 phosphoglycerate kinase [Candidatus Peribacteria bacterium] diamond 282 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
32518788 32518788 PRJNA734348_P_NODE_124559_length_243_cov_0.905882_g123861_i0 PRJNA734348 124559 243 0.905882 2.20129326 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 104 2.1999999999999996e-24   NR MBP9750653.1 2735830 g123861 i0 69.3 0.925925925925926 75 23 92.6 0 18 242 238 312 MBP9750653.1 S-layer homology domain-containing protein [Candidatus Peribacteraceae bacterium] diamond 225 104 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;