RNAquarium Metadata Server
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contig_metadata

32 rows where bioproject = "PRJNA734348", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 32 ✖

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJNA734348 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
718627 718627 PRJNA734348_P_NODE_62481_length_277_cov_1.509804_g61784_i0 PRJNA734348 62481 277 1.509804 4.18215708 Entamoeba histolytica 5759 Evosea other_Eukaryota 97.1 1.16e-15   NTclustered gi|415339|emb|X65163.1| 5759 g61784 i0 84.536 0.675090252707581 97 15 35 0 10 106 6064 6160 E.histolytica rRNA blastn 187 97.1 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
1994082 1994082 PRJNA734348_P_NODE_34422_length_332_cov_2.150579_g33726_i0 PRJNA734348 34422 332 2.150579 7.13992228 Soliformovum expulsum 435423 Evosea other_Eukaryota 420 7.439999999999998e-113   NTclustered gi|260909293|gb|FJ766479.1| 435423 g33726 i0 89.521 88.7409638554217 334 31 99 1 1 330 1502 1835 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 29462 420 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
4546452 4546452 PRJNA734348_P_NODE_30944_length_349_cov_4.231884_g30248_i0 PRJNA734348 30944 349 4.231884 14.76927516 Didymium sp. ECH14/I 428393 Evosea other_Eukaryota 424 6.06e-114   NTclustered gi|126508458|gb|EF118757.1| 428393 g30248 i0 88.857 96.7220630372493 350 32 100 7 1 349 1415 1758 Didymium sp. strain ECH14/I small subunit ribosomal RNA gene, partial sequence blastn 33756 424 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium sp. ECH14/I
5821714 5821714 PRJNA734348_P_NODE_35945_length_325_cov_2.932540_g35249_i0 PRJNA734348 35945 325 2.93254 9.530755 Comatricha laxa 1450423 Evosea other_Eukaryota 429 1.2099999999999999e-115   NTclustered gi|2324671363|gb|ON155996.1| 1450423 g35249 i0 92.182 51.4769230769231 307 19 94 5 1 305 1093 790 Comatricha laxa isolate EdHa large subunit ribosomal RNA gene, partial sequence; and ribozyme genes, complete sequence blastn 16730 429 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Comatricha Comatricha laxa
6301554 6301554 PRJNA734348_P_NODE_79005_length_261_cov_2.319149_g78307_i0 PRJNA734348 79005 261 2.319149 6.05297889 Fuligo 159719 Evosea other_Eukaryota 455 1.55e-123   NTclustered gi|2270227767|gb|ON973803.1| 159720 g78307 i0 98.084 79.1647509578544 261 5 100 0 1 261 255 515 Fuligo septica isolate NJ2-2 small subunit ribosomal RNA gene, partial sequence blastn 20662 455 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
7096525 7096525 PRJNA734348_P_NODE_24326_length_397_cov_17.018519_g23631_i0 PRJNA734348 24326 397 17.018519 67.56352043 Soliformovum expulsum 435423 Evosea other_Eukaryota 350 1.2e-91   NTclustered gi|260909293|gb|FJ766479.1| 435423 g23631 i0 83.005 35.9571788413098 406 47 100 18 1 397 419 27 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 14275 350 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
7097470 7097470 PRJNA734348_P_NODE_70906_length_269_cov_1.270408_g70208_i0 PRJNA734348 70906 269 1.270408 3.41739752 Entamoeba gingivalis 38877 Evosea other_Eukaryota 492 1.23e-134   NTclustered gi|2781670138|dbj|LC832210.1| 38877 g70208 i0 99.628 78.3048327137546 269 1 100 0 1 269 192 460 Entamoeba gingivalis ST1-1_human_Ishikawa_H31_2017 gene for 18S ribosomal RNA, partial sequence blastn 21064 492 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba gingivalis
8850389 8850389 PRJNA734348_P_NODE_59967_length_279_cov_4.674757_g59270_i0 PRJNA734348 59967 279 4.674757 13.04257203 Physariida 5789 Evosea other_Eukaryota 182 3.14e-41   NTclustered gi|475222|emb|X78959.1| 35220 g59270 i0 91.111 17.4372759856631 135 10 48 2 1 135 378 246 P.flavicomum (UFF6) large subunit rRNA gene blastn 4865 183 0.994535519125683 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum flavicomum
9647398 9647398 PRJNA734348_P_NODE_81068_length_260_cov_0.796791_g80370_i0 PRJNA734348 81068 260 0.796791 2.0716566 Entamoeba gingivalis 38877 Evosea other_Eukaryota 475 1.1899999999999999e-129   NTclustered gi|2781670130|dbj|LC832202.1| 38877 g80370 i0 99.615 98.8076923076923 260 1 100 0 1 260 311 570 Entamoeba gingivalis ST1-2_human_Ishikawa_H11_2017 gene for 18S ribosomal RNA, partial sequence blastn 25690 475 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba gingivalis
10922328 10922328 PRJNA734348_P_NODE_4989_length_1192_cov_6.387846_g4559_i0 PRJNA734348 4989 1192 6.387846 76.14312432 Echinostelium bisporum 1973072 Evosea other_Eukaryota 1410 0   NTclustered gi|1465309735|gb|MH809395.1| 1973072 g4559 i0 88.27 49.9186241610738 1202 109 100 30 1 1192 11 1190 Echinostelium bisporum isolate Nx14-A1 small subunit ribosomal RNA gene, partial sequence blastn 59503 1410 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium bisporum
12676446 12676446 PRJNA734348_P_NODE_11570_length_670_cov_9.685092_g10922_i0 PRJNA734348 11570 670 9.685092 64.8901164 Variosea 2605334 Evosea other_Eukaryota 682 0   NTclustered gi|260909293|gb|FJ766479.1| 435423 g10922 i0 85.163 43.5492537313433 674 90 100 10 1 670 1230 563 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 29178 682 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
14747551 14747551 PRJNA734348_P_NODE_63692_length_276_cov_1.349754_g62995_i0 PRJNA734348 63692 276 1.349754 3.72532104 Ophiotheca pedata 1680578 Evosea other_Eukaryota 300 8.21e-77   NTclustered gi|2250222264|gb|ON713372.1| 1680578 g62995 i0 86.594 100.615942028986 276 31 100 6 1 276 1592 1323 Perichaena pedata voucher MA81941 small subunit ribosomal RNA gene, partial sequence blastn 27770 300 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Ophiotheca Ophiotheca pedata
18568505 18568505 PRJNA734348_P_NODE_100155_length_249_cov_0.875000_g99457_i0 PRJNA734348 100155 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 129 1.19e-32   NR PRP81837.1 1890364 g99457 i0 66.3 3.98795180722892 83 28 100 0 249 1 83 165 PRP81837.1 pten, isoform E [Planoprotostelium fungivorum] diamond 993 130 0.992307692307692 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
19844698 19844698 PRJNA734348_P_NODE_20096_length_448_cov_5.952000_g19405_i0 PRJNA734348 20096 448 5.952 26.66496 Didymium spongiosum 289992 Evosea other_Eukaryota 252 3.9799999999999995e-62   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g19405 i0 77.852 28.03125 447 72 99 18 4 445 5214 5638 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12558 252 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum
19845587 19845587 PRJNA734348_P_NODE_63996_length_275_cov_3.445545_g63299_i0 PRJNA734348 63996 275 3.445545 9.47524875 Entamoeba gingivalis 38877 Evosea other_Eukaryota 494 3.4899999999999997e-135   NTclustered gi|1200176476|gb|KX027290.1| 38877 g63299 i0 100 70.2472727272727 267 0 97 0 9 275 3 269 Entamoeba gingivalis strain O46 18S ribosomal RNA gene, partial sequence blastn 19318 494 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba gingivalis
23670556 23670556 PRJNA734348_P_NODE_14439_length_567_cov_6.874494_g13759_i0 PRJNA734348 14439 567 6.874494 38.97838098 Echinostelium minutum 300235 Evosea other_Eukaryota 228 8.659999999999997e-55   NTclustered gi|381139237|emb|HE655044.1| 300235 g13759 i0 84.615 21.1393298059965 234 31 41 5 1 231 937 706 Echinostelium minutum partial 28S rRNA gene, strain ATCC 22345 blastn 11986 228 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium minutum
23670662 23670662 PRJNA734348_P_NODE_150299_length_197_cov_12.274194_g149601_i0 PRJNA734348 150299 197 12.274194 24.18016218 Soliformovum irregulare 435424 Evosea other_Eukaryota 106 1.29e-18   NTclustered gi|381139238|emb|HE655045.1| 435424 g149601 i0 90.244 3.46700507614213 82 7 42 1 14 95 255 335 Soliformovum irregulare partial 28S rRNA gene, strain ATCC 26826 blastn 683 106 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
23670682 23670682 PRJNA734348_P_NODE_15359_length_542_cov_3.373134_g14676_i0 PRJNA734348 15359 542 3.373134 18.28238628 Didymium iridis 5793 Evosea other_Eukaryota 178 8.419999999999999e-40   NTclustered gi|2687|emb|X60210.1| 5793 g14676 i0 82.488 7.28044280442804 217 24 40 11 328 542 5257 5053 D.iridis LSU rRNA gene blastn 3946 178 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
24944638 24944638 PRJNA734348_P_NODE_39240_length_312_cov_5.221757_g38544_i0 PRJNA734348 39240 312 5.221757 16.29188184 Echinostelium bisporum 1973072 Evosea other_Eukaryota 459 1.47e-124   NTclustered gi|1465309735|gb|MH809395.1| 1973072 g38544 i0 93.851 52.0544871794872 309 12 98 6 1 307 1280 1583 Echinostelium bisporum isolate Nx14-A1 small subunit ribosomal RNA gene, partial sequence blastn 16241 459 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium bisporum
26704031 26704031 PRJNA734348_P_NODE_66981_length_272_cov_4.241206_g66284_i0 PRJNA734348 66981 272 4.241206 11.53608032 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 48.1 6.9e-4   NR PRP83806.1 1890364 g66284 i0 50 0.551470588235294 50 25 55.1 0 105 254 1060 1109 PRP83806.1 ral GTPase-activating protein subunit alpha-2 [Planoprotostelium fungivorum] diamond 150 48.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27020852 27020852 PRJNA734348_P_NODE_72822_length_267_cov_1.546392_g72124_i0 PRJNA734348 72822 267 1.546392 4.12886664 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 60.1 3.75e-8   NR KYR02690.1 361077 g72124 i0 31.4 0.966292134831461 86 59 96.6 0 8 265 257 342 KYR02690.1 hypothetical protein DLAC_00149 [Tieghemostelium lacteum] diamond 258 60.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
27062591 27062591 PRJNA734348_P_NODE_127862_length_242_cov_0.911243_g127164_i0 PRJNA734348 127862 242 0.911243 2.20520806 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.1 1.66e-6   NR XP_645258.1 352472 g127164 i0 35.5 1.90909090909091 76 48 93 1 11 235 435 510 XP_645258.1 G-protein-coupled receptor family 3 protein 9 [Dictyostelium discoideum AX4] diamond 462 55.5 0.992792792792793 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27557776 27557776 PRJNA734348_P_NODE_70564_length_269_cov_1.571429_g69866_i0 PRJNA734348 70564 269 1.571429 4.22714401 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 84.7 8.7e-17   NR PRP85240.1 1890364 g69866 i0 46.4 0.936802973977695 84 44 92.6 1 258 10 84 167 PRP85240.1 p21-activated protein kinase [Planoprotostelium fungivorum] diamond 252 84.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27852227 27852227 PRJNA734348_P_NODE_137184_length_236_cov_3.570552_g136486_i0 PRJNA734348 137184 236 3.570552 8.42650272 Eumycetozoa 142796 Evosea other_Eukaryota 50.1 8.9e-5   NR KAF2077531.1 133409 g136486 i0 59.5 1.88135593220339 37 15 47 0 124 234 505 541 KAF2077531.1 hypothetical protein CYY_001149 [Polysphondylium violaceum] diamond 444 50.4 0.994047619047619 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
28568273 28568273 PRJNA734348_P_NODE_70927_length_269_cov_1.250000_g70229_i0 PRJNA734348 70927 269 1.25 3.3625 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 73.6 3.11e-13   NR XP_012760194.1 1410327 g70229 i0 44.7 1.77323420074349 76 31 84.8 2 4 231 161 225 XP_012760194.1 hypothetical protein SAMD00019534_038480, partial [Acytostelium subglobosum LB1] diamond 477 73.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
29462298 29462298 PRJNA734348_P_NODE_98130_length_250_cov_0.870056_g97432_i0 PRJNA734348 98130 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 49.3 1.97e-4   NR KAF2068773.1 133409 g97432 i0 75 0.864 32 8 38.4 0 250 155 99 130 KAF2068773.1 hypothetical protein CYY_009902 [Polysphondylium violaceum] diamond 216 49.7 0.991951710261569 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29578502 29578502 PRJNA734348_P_NODE_96730_length_250_cov_0.870056_g96032_i0 PRJNA734348 96730 250 0.870056 2.17514 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 70.9 2.7e-12   NR KAH3742840.1 1580589 g96032 i0 66 0.564 47 16 56.4 0 144 4 19 65 KAH3742840.1 protein phosphatase 2C [Pelomyxa schiedti] diamond 141 70.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29768070 29768070 PRJNA734348_P_NODE_89091_length_253_cov_1.450000_g88393_i0 PRJNA734348 89091 253 1.45 3.6685 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 43.9 0.00682   NR KAH3764260.1 1580589 g88393 i0 42 0.592885375494071 50 29 59.3 0 56 205 43 92 KAH3764260.1 hypothetical protein Pelo_3878 [Pelomyxa schiedti] diamond 150 43.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30779120 30779120 PRJNA734348_P_NODE_101654_length_249_cov_0.875000_g100956_i0 PRJNA734348 101654 249 0.875 2.17875 Polysphondylium violaceum 133409 Evosea other_Eukaryota 42.7 0.0387   NR KAF2071425.1 133409 g100956 i0 32.9 0.843373493975904 70 47 84.3 0 214 5 128 197 KAF2071425.1 hypothetical protein CYY_007249, partial [Polysphondylium violaceum] diamond 210 42.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30820970 30820970 PRJNA734348_P_NODE_48154_length_292_cov_2.369863_g47457_i0 PRJNA734348 48154 292 2.369863 6.91999996 Evosea 2605435 Evosea other_Eukaryota 43.1 0.049   NR XP_020435465.1 670386 g47457 i0 51.4 0.708904109589041 37 18 38 0 174 284 758 794 XP_020435465.1 actin binding protein [Heterostelium album PN500] diamond 207 43.5 0.990804597701149 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
30968892 30968892 PRJNA734348_P_NODE_73554_length_266_cov_2.108808_g72856_i0 PRJNA734348 73554 266 2.108808 5.60942928 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 68.6 4.14e-11   NR PRP73007.1 1890364 g72856 i0 53.1 8.52631578947368 49 23 55.3 0 153 7 1079 1127 PRP73007.1 retrotransposon nucleocapsid protein, partial [Planoprotostelium fungivorum] diamond 2268 68.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31664168 31664168 PRJNA734348_P_NODE_40957_length_310_cov_2.898734_g40261_i0 PRJNA734348 40957 310 2.898734 8.9860754 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 64.7 1.44e-9   NR KYQ91515.1 361077 g40261 i0 47.5 1.5 61 31 59 1 183 1 143 202 KYQ91515.1 actin [Tieghemostelium lacteum] diamond 465 64.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;