RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA734313" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 5 ✖

bioproject 1

  • PRJNA734313 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28757669 28757669 PRJNA734313_S_NODE_20587_length_205_cov_9.575949_g20474_i0 PRJNA734313 20587 205 9.575949 19.63069545 Escherichia phage Copypasta 3096133 Viruses Viruses 42.4 0.0033   NR WPH57058.1 3096133 g20474 i0 70.6 0.497560975609756 34 10 49.8 0 1 102 3 36 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 102 42.4 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31284604 31284604 PRJNA734313_S_NODE_20215_length_207_cov_3.287500_g20102_i0 PRJNA734313 20215 207 3.2875 6.805125 Escherichia phage Copypasta 3096133 Viruses Viruses 46.2 9.99e-5   NR WPH57058.1 3096133 g20102 i0 69.7 0.478260869565217 33 10 47.8 0 193 95 18 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 99 46.2 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31442860 31442860 PRJNA734313_S_NODE_13976_length_251_cov_18.411765_g13863_i0 PRJNA734313 13976 251 18.411765 46.21353015 Escherichia phage Copypasta 3096133 Viruses Viruses 47.8 4.21e-5   NR WPH57058.1 3096133 g13863 i0 62 0.597609561752988 50 19 59.8 0 244 95 1 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 150 47.8 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31759112 31759112 PRJNA734313_S_NODE_11217_length_280_cov_18.579399_g11104_i0 PRJNA734313 11217 280 18.579399 52.0223172 Escherichia phage Copypasta 3096133 Viruses Viruses 44.3 0.00133   NR WPH57058.1 3096133 g11104 i0 60 0.535714285714286 50 20 53.6 0 8 157 1 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 150 44.3 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31822258 31822258 PRJNA734313_S_NODE_14437_length_247_cov_8.305000_g14324_i0 PRJNA734313 14437 247 8.305 20.51335 Escherichia phage Copypasta 3096133 Viruses Viruses 53.1 3.06e-7   NR WPH57058.1 3096133 g14324 i0 62.5 0.582995951417004 48 18 58.3 0 247 104 3 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 144 53.1 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;