RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA734313", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA734313 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
716699 716699 PRJNA734313_S_NODE_20721_length_205_cov_1.291139_g20608_i0 PRJNA734313 20721 205 1.291139 2.64683495 Mycoplasma wenyonii 65123 Bacteria Bacteria 318 1.6e-82   NTclustered gi|395455868|gb|CP003703.1| 1197325 g20608 i0 94.634 1 205 11 100 0 1 205 31678 31474 Mycoplasma wenyonii str. Massachusetts, complete genome blastn 205 318 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma wenyonii
27684590 27684590 PRJNA734313_S_NODE_19844_length_209_cov_9.259259_g19731_i0 PRJNA734313 19844 209 9.259259 19.35185131 Spiroplasma sp. JKS002671 2904537 Bacteria Bacteria 63.2 1.42e-9   NR MCL8211089.1 2904538 g19731 i0 81.1 0.5311004784689 37 7 53.1 0 138 28 1 37 MCL8211089.1 hypothetical protein [Spiroplasma sp. JKS002671] diamond 111 63.2 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma sp. JKS002671

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;