RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA734313" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA734313 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31000362 31000362 PRJNA734313_S_NODE_5654_length_377_cov_12.684848_g5541_i0 PRJNA734313 5654 377 12.684848 47.82187696 Halolamina salina 1220023 Archaea Archaea 48.5 0.00128   NR MFD1525350.1 1220023 g5541 i0 33 0.843501326259947 106 62 77.2 3 19 309 171 276 MFD1525350.1 hypothetical protein [Halolamina salina] diamond 318 48.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halolamina Halolamina salina
32749299 32749299 PRJNA734313_S_NODE_1260_length_593_cov_10.891941_g1163_i0 PRJNA734313 1260 593 10.891941 64.58921013 root 1 Root_unresolved Root_unresolved 47.8 0.0108   NR MFD1525350.1 1220023 g1163 i0 33 0.951096121416526 103 60 47.6 3 350 69 174 276 MFD1525350.1 hypothetical protein [Halolamina salina] diamond 564 47.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halolamina Halolamina salina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;