RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA734313", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA734313 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30652542 30652542 PRJNA734313_S_NODE_26733_length_179_cov_1.446970_g26620_i0 PRJNA734313 26733 179 1.44697 2.5900763 Giardia intestinalis ATCC 5 5741 Fornicata other_Eukaryota 43.5 0.00865   NR EES99494.1 598745 g26620 i0 51.4 0.58659217877095 35 17 58.7 0 10 114 1711 1745 EES99494.1 CXC-rich protein [Giardia intestinalis ATCC 50581] diamond 105 43.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
32592003 32592003 PRJNA734313_S_NODE_30299_length_167_cov_2.550000_g30186_i0 PRJNA734313 30299 167 2.55 4.2585 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.8 3.89e-11   NR TNJ26497.1 5742 g30186 i0 50 4.8502994011976 52 24 93.4 1 159 4 37 86 TNJ26497.1 RING-H2 zinc finger domain-containing protein [Giardia muris] diamond 810 62.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;