RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA733995", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA733995 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23669648 23669648 PRJNA733995_P_NODE_12759_length_247_cov_0.885057_g12712_i0 PRJNA733995 12759 247 0.885057 2.18609079 Chloroflexota bacterium 2026724 Bacteria Bacteria 62.8 3.08e-9   NR MEW6505855.1 2026724 g12712 i0 67.3 0.595141700404858 49 15 59.5 1 97 243 1 48 MEW6505855.1 hypothetical protein [Chloroflexota bacterium] diamond 147 62.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31000349 31000349 PRJNA733995_P_NODE_9094_length_286_cov_1.399061_g9047_i0 PRJNA733995 9094 286 1.399061 4.00131446 Anaerolineae bacterium 2052143 Bacteria Bacteria 127 8.449999999999998e-35   NR MCL6509838.1 2052143 g9047 i0 68.1 1.95104895104895 94 30 98.6 0 2 283 73 166 MCL6509838.1 lytic transglycosylase domain-containing protein [Anaerolineae bacterium] diamond 558 127 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32833569 32833569 PRJNA733995_P_NODE_8460_length_295_cov_2.923423_g8413_i0 PRJNA733995 8460 295 2.923423 8.62409785 Chloroflexia bacterium 2448782 Bacteria Bacteria 93.6 2.08e-21   NR MBA2775705.1 2448782 g8413 i0 85.7 2.50169491525424 49 7 49.8 0 295 149 65 113 MBA2775705.1 gliding-motility protein MglA [Chloroflexia bacterium] diamond 738 93.6 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;