RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA733995" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA733995 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7574652 7574652 PRJNA733995_P_NODE_12146_length_250_cov_0.870056_g12099_i0 PRJNA733995 12146 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 462 8.83e-126   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g12099 i0 100 100 250 0 100 0 1 250 13267 13516 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 25000 462 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11400457 11400457 PRJNA733995_P_NODE_5849_length_355_cov_15.372340_g5802_i0 PRJNA733995 5849 355 15.37234 54.571807 root 1 Root_unresolved Root_unresolved 645 1.2099999999999996e-180   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g5802 i0 99.438 100.281690140845 356 1 100 1 1 355 11171 11526 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 35600 651 0.990783410138249 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
20323247 20323247 PRJNA733995_P_NODE_12896_length_246_cov_0.890173_g12849_i0 PRJNA733995 12896 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 449 6.74e-122   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g12849 i0 99.593 100 246 1 100 0 1 246 13167 12922 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 24600 449 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;