RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA733995", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA733995 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29957555 29957555 PRJNA733995_P_NODE_4771_length_396_cov_1.681115_g4724_i0 PRJNA733995 4771 396 1.681115 6.6572154 Rhizomucor pusillus 4840 Fungi Fungi 55.5 2.25e-6   NR XP_069240720.1 4840 g4724 i0 40 0.454545454545455 60 36 45.5 0 1 180 120 179 XP_069240720.1 uncharacterized protein VTP01DRAFT_9214 [Rhizomucor pusillus] diamond 180 55.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
31157887 31157887 PRJNA733995_P_NODE_9395_length_282_cov_1.105263_g9348_i0 PRJNA733995 9395 282 1.105263 3.11684166 Mycotypha africana 64632 Fungi Fungi 93.2 1.14e-19   NR XP_052939467.1 64632 g9348 i0 51.1 7.71276595744681 90 43 95.7 1 273 4 525 613 XP_052939467.1 P-loop containing nucleoside triphosphate hydrolase protein [Mycotypha africana] diamond 2175 93.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;