RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA733995" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA733995 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27904984 27904984 PRJNA733995_P_NODE_7685_length_310_cov_2.869198_g7638_i0 PRJNA733995 7685 310 2.869198 8.8945138 Bodo saltans 75058 Euglenozoa other_Eukaryota 92 2.96e-21   NR CUG35017.1 75058 g7638 i0 92 1.45161290322581 50 4 48.4 0 150 1 52 101 CUG35017.1 Hypothetical protein, putative, partial [Bodo saltans] diamond 450 92 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31032082 31032082 PRJNA733995_P_NODE_11635_length_254_cov_1.646409_g11588_i0 PRJNA733995 11635 254 1.646409 4.18187886 Bodo saltans 75058 Euglenozoa other_Eukaryota 136 6.1399999999999995e-37   NR CUG47678.1 75058 g11588 i0 83.3 0.921259842519685 78 13 92.1 0 253 20 264 341 CUG47678.1 diacylglycerol acyltransferase, putative [Bodo saltans] diamond 234 136 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;