contig_metadata
9 rows where bioproject = "PRJNA728642", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 712729 | 712729 | PRJNA728642_P_NODE_13901_length_270_cov_1.172589_g13630_i0 | PRJNA728642 | 13901 | 270 | 1.172589 | 3.1659903 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 316 | 7.95e-82 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g13630 | i0 | 88.104 | 204.514814814815 | 269 | 28 | 99 | 4 | 1 | 268 | 3251129 | 3251394 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 55219 | 316 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 4541110 | 4541110 | PRJNA728642_P_NODE_12044_length_290_cov_1.649770_g11773_i0 | PRJNA728642 | 12044 | 290 | 1.64977 | 4.784333 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 503 | 6.17e-138 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g11773 | i0 | 97.931 | 94.5 | 290 | 6 | 100 | 0 | 1 | 290 | 510901 | 511190 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 27405 | 503 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 7091430 | 7091430 | PRJNA728642_P_NODE_10306_length_316_cov_2.279835_g10035_i0 | PRJNA728642 | 10306 | 316 | 2.279835 | 7.2042786 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 479 | 1.1499999999999999e-130 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g10035 | i0 | 93.987 | 81.1740506329114 | 316 | 19 | 100 | 0 | 1 | 316 | 511192 | 510877 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 25651 | 479 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 8366265 | 8366265 | PRJNA728642_P_NODE_7467_length_374_cov_2.003322_g7196_i0 | PRJNA728642 | 7467 | 374 | 2.003322 | 7.49242428 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 579 | 1.3199999999999996e-160 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g7196 | i0 | 94.667 | 27.3582887700535 | 375 | 17 | 100 | 3 | 1 | 374 | 512479 | 512107 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 10232 | 579 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 10123604 | 10123604 | PRJNA728642_P_NODE_4628_length_480_cov_2.289926_g4357_i0 | PRJNA728642 | 4628 | 480 | 2.289926 | 10.9916448 | Bdellovibrio | 958 | Bacteria | Bacteria | 843 | 0 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g4357 | i0 | 98.337 | 89.5520833333333 | 481 | 7 | 100 | 1 | 1 | 480 | 784214 | 784694 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 42985 | 843 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 13466637 | 13466637 | PRJNA728642_P_NODE_3231_length_581_cov_2.525591_g2962_i0 | PRJNA728642 | 3231 | 581 | 2.525591 | 14.67368371 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 1062 | 0 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g2962 | i0 | 99.656 | 241.039586919105 | 581 | 2 | 100 | 0 | 1 | 581 | 1292769 | 1293349 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 140044 | 1062 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 16497980 | 16497980 | PRJNA728642_P_NODE_3233_length_581_cov_1.814961_g2964_i0 | PRJNA728642 | 3233 | 581 | 1.814961 | 10.544923410000001 | Bdellovibrio | 958 | Bacteria | Bacteria | 1000 | 0 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g2964 | i0 | 97.759 | 201.480206540448 | 580 | 13 | 99 | 0 | 1 | 580 | 944668 | 945247 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 117060 | 1000 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 22390489 | 22390489 | PRJNA728642_P_NODE_8938_length_340_cov_2.000000_g8667_i0 | PRJNA728642 | 8938 | 340 | 2 | 6.8 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 527 | 4.3799999999999985e-145 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g8667 | i0 | 94.706 | 123.429411764706 | 340 | 17 | 100 | 1 | 1 | 340 | 1293818 | 1293480 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 41966 | 527 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 30400316 | 30400316 | PRJNA728642_P_NODE_19653_length_241_cov_0.916667_g19382_i0 | PRJNA728642 | 19653 | 241 | 0.916667 | 2.20916747 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 85.5 | 3.22e-17 | NR | MBK9295192.1 | 2599941 | g19382 | i0 | 49.4 | 1.9045643153527 | 77 | 39 | 95.9 | 0 | 240 | 10 | 146 | 222 | MBK9295192.1 HAMP domain-containing protein [Oligoflexia bacterium] | diamond | 459 | 85.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;