RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA728642", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA728642 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16015391 16015391 PRJNA728642_P_NODE_19553_length_241_cov_0.916667_g19282_i0 PRJNA728642 19553 241 0.916667 2.20916747 Candidatus Nitrosymbiomonas proteolyticus 2608984 Bacteria Bacteria 303 5.42e-78   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g19282 i0 89.916 180.630705394191 238 20 98 4 2 237 37143 37378 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 43532 303 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus
30726064 30726064 PRJNA728642_P_NODE_17194_length_247_cov_1.264368_g16923_i0 PRJNA728642 17194 247 1.264368 3.12298896 Bacillati 1783272 Bacteria Bacteria 45.4 0.00435   NR CUU36179.1 1661583 g16923 i0 81.5 4.53036437246964 27 4 31.6 1 245 168 470 496 CUU36179.1 hydrophobic/amphiphilic exporter-1, HAE1 family [Armatimonadetes bacterium DC] diamond 1119 45.8 0.991266375545852 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium DC

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;