RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA725806", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 7 ✖

tax_phylum 1

  • Preplasmiviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA725806 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4540149 4540149 PRJNA725806_P_NODE_141104_length_173_cov_1.757353_g140802_i0 PRJNA725806 141104 173 1.757353 3.04022069 Adintovirus androctonus13035 3115887 Viruses Viruses 270 3.69e-68   NTclustered gi|2710390252|tpg|BK066392.1| 3115887 g140802 i0 94.798 1 173 9 100 0 1 173 2720 2892 MAG TPA_asm: Adintovirus androctonus13035 isolate Adinto13035 genomic sequence blastn 173 270 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus androctonus13035
12191226 12191226 PRJNA725806_P_NODE_34690_length_276_cov_4.079498_g34393_i0 PRJNA725806 34690 276 4.079498 11.25941448 Adintovirus androctonus13035 3115887 Viruses Viruses 182 3.1e-41   NTclustered gi|2710390252|tpg|BK066392.1| 3115887 g34393 i0 88.125 0.579710144927536 160 9 58 2 23 182 2510 2361 MAG TPA_asm: Adintovirus androctonus13035 isolate Adinto13035 genomic sequence blastn 160 182 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus androctonus13035
28347159 28347159 PRJNA725806_P_NODE_89126_length_205_cov_9.910714_g88824_i0 PRJNA725806 89126 205 9.910714 20.3169637 Adintovirus androctonus13 3115887 Viruses Viruses 44.3 0.00646   NR DBA46921.1 3115887 g88824 i0 61.3 0.878048780487805 31 12 45.4 0 5 97 381 411 DBA46921.1 MAG TPA_asm: Hexon [Adintovirus androctonus13035] diamond 180 44.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus androctonus13035
29578324 29578324 PRJNA725806_P_NODE_8610_length_389_cov_3.838068_g8325_i0 PRJNA725806 8610 389 3.838068 14.93008452 Adintovirus homo33 3115912 Viruses Viruses 65.9 1.39e-9   NR DBA48451.1 3115912 g8325 i0 52.1 0.370179948586118 48 23 37 0 162 19 6 53 DBA48451.1 MAG TPA_asm: Hexon [Adintovirus homo3309] diamond 144 65.9 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus homo3309
30368693 30368693 PRJNA725806_P_NODE_8712_length_388_cov_2.444444_g8427_i0 PRJNA725806 8712 388 2.444444 9.48444272 Adintovirus androctonus13 3115887 Viruses Viruses 154 2.3299999999999993e-42   NR DBA46921.1 3115887 g8427 i0 58.9 1.91752577319588 124 51 95.9 0 1 372 262 385 DBA46921.1 MAG TPA_asm: Hexon [Adintovirus androctonus13035] diamond 744 154 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus androctonus13035
31980371 31980371 PRJNA725806_P_NODE_111498_length_189_cov_5.940789_g111196_i0 PRJNA725806 111498 189 5.940789 11.22809121 Megastigmus wasp adintovirus 2609859 Viruses Viruses 45.1 0.00279   NR DAC81331.1 2609859 g111196 i0 57.1 0.555555555555556 35 15 55.6 0 182 78 232 266 DAC81331.1 TPA_asm: PolB [Megastigmus wasp adintovirus] diamond 105 45.1 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Megastigmus wasp adintovirus
32644286 32644286 PRJNA725806_P_NODE_92120_length_203_cov_3.843373_g91818_i0 PRJNA725806 92120 203 3.843373 7.80204719 Adintovirus tuber11 3115950 Viruses Viruses 61.2 6.03e-9   NR DBA47561.1 3115950 g91818 i0 52.3 1.71428571428571 65 26 91.6 2 187 2 285 347 DBA47561.1 MAG TPA_asm: Adintoc3 [Adintovirus tuber11084] diamond 348 61.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus tuber11084

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;