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contig_metadata

4 rows where bioproject = "PRJNA725806", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Nitrososphaerota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA725806 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27810604 27810604 PRJNA725806_P_NODE_67524_length_226_cov_2.380952_g67224_i0 PRJNA725806 67524 226 2.380952 5.38095152 Nitrososphaerota archaeon 2026795 Archaea Archaea 42.4 0.041   NR MDR1992039.1 2026795 g67224 i0 33.8 0.942477876106195 71 41 87.6 2 25 222 334 403 MDR1992039.1 CCA tRNA nucleotidyltransferase [Nitrososphaerota archaeon] diamond 213 42.4 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
30557574 30557574 PRJNA725806_P_NODE_63493_length_230_cov_12.932642_g63195_i0 PRJNA725806 63493 230 12.932642 29.7450766 Candidatus Nitrosotenuis sp. 2507556 Archaea Archaea 49.7 1.11e-4   NR MFM8658812.1 2507556 g63195 i0 47.4 1.48695652173913 57 28 71.7 2 1 165 218 274 MFM8658812.1 RNA-directed DNA polymerase [Candidatus Nitrosotenuis sp.] diamond 342 49.7 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp.
31379549 31379549 PRJNA725806_P_NODE_109176_length_191_cov_2.266234_g108874_i0 PRJNA725806 109176 191 2.266234 4.32850694 Nitrosopumilus sp. 2024843 Archaea Archaea 63.2 1.16e-9   NR MCH2406070.1 2024843 g108874 i0 52.5 0.926701570680628 59 26 92.7 1 186 10 183 239 MCH2406070.1 reverse transcriptase family protein [Nitrosopumilus sp.] diamond 177 63.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31632419 31632419 PRJNA725806_P_NODE_145136_length_171_cov_2.149254_g144834_i0 PRJNA725806 145136 171 2.149254 3.67522434 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 40.8 0.0344   NR HWY36167.1 2202732 g144834 i0 53.1 0.56140350877193 32 15 56.1 0 125 30 30 61 HWY36167.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 96 40.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;