RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA725806", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA725806 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27463236 27463236 PRJNA725806_P_NODE_183583_length_154_cov_5.538462_g183281_i0 PRJNA725806 183583 154 5.538462 8.52923148 Photinus pyralis orthomyxo-like virus 1 2137183 Viruses Viruses 60.8 4.52e-9   NR AVR52565.1 2137183 g183281 i0 64.9 0.720779220779221 37 13 72.1 0 1 111 156 192 AVR52565.1 NP [Photinus pyralis orthomyxo-like virus 1] diamond 111 60.8 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Photinus pyralis orthomyxo-like virus 1
29389292 29389292 PRJNA725806_P_NODE_99689_length_197_cov_6.700000_g99387_i0 PRJNA725806 99689 197 6.7 13.199 Orthopteran chu-related virus OKIAV152 2792595 Viruses Viruses 58.2 7.36e-8   NR QPL15390.1 2792595 g99387 i0 48 0.761421319796954 50 26 76.1 0 2 151 413 462 QPL15390.1 glycoprotein [Orthopteran chu-related virus OKIAV152] diamond 150 58.2 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae   Orthopteran chu-related virus OKIAV152
32613057 32613057 PRJNA725806_P_NODE_52520_length_245_cov_1.639423_g52223_i0 PRJNA725806 52520 245 1.639423 4.01658635 Blattodean orthomyxo-related virus OKIAV181 2746285 Viruses Viruses 85.5 3.29e-17   NR QMP82185.1 2746285 g52223 i0 53.9 0.930612244897959 76 35 93.1 0 230 3 376 451 QMP82185.1 nucleocapsid protein [Blattodean orthomyxo-related virus OKIAV181] diamond 228 85.5 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Blattodean orthomyxo-related virus OKIAV181

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;