RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA725806", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA725806 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29483588 29483588 PRJNA725806_P_NODE_70210_length_223_cov_2.784946_g69909_i0 PRJNA725806 70210 223 2.784946 6.21042958 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.5 0.0142   NR MEE8360239.1 2035772 g69909 i0 36.8 0.914798206278027 68 40 91.5 1 215 12 165 229 MEE8360239.1 alpha/beta fold hydrolase [Candidatus Omnitrophota bacterium] diamond 204 43.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32486889 32486889 PRJNA725806_P_NODE_28039_length_292_cov_2.764706_g27742_i0 PRJNA725806 28039 292 2.764706 8.07294152 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.5 0.0367   NR MCM8831988.1 2035772 g27742 i0 42.9 0.575342465753425 56 32 57.5 0 285 118 215 270 MCM8831988.1 glycosyltransferase [Candidatus Omnitrophota bacterium] diamond 168 43.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;